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Sample GSM618103 Query DataSets for GSM618103
Status Public on May 22, 2013
Title Adherent, rep3
Sample type RNA
 
Source name HUVEC
Organism Homo sapiens
Characteristics treatment: Adherent MP treated cells
cell type: HUVEC
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN Rneasy Plus mini kit according to manufacturer's protocol. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description H H 3
Data processing The data were normalised using quantile normalisation with GenomeStudio software.
 
Submission date Nov 04, 2010
Last update date May 22, 2013
Contact name Trinidad Montero
E-mail(s) t.monteromelendez@qmul.ac.uk
Organization name Whilliam Harvey Research Institute, Bart's and The London School of Medicine; Queen Mary University of London
Department Biochemical Pharmacology
Street address Charterhouse Square
City London
ZIP/Postal code EC1M 6BQ
Country United Kingdom
 
Platform ID GPL10558
Series (1)
GSE25154 Genome-wide analysis of the affect of neutrophil-derived microparticles on HUVECs

Data table header descriptions
ID_REF
VALUE Quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 112.8074 0.6233766
ILMN_2055271 145.7247 0.04545455
ILMN_1736007 116.081 0.5571429
ILMN_2383229 115.2626 0.574026
ILMN_1806310 109.2389 0.6844156
ILMN_1779670 96.0919 0.7948052
ILMN_1653355 130.8105 0.2285714
ILMN_1717783 87.62046 0.864935
ILMN_1705025 133.4149 0.1805195
ILMN_1814316 122.179 0.4220779
ILMN_2359168 82.64571 0.9116883
ILMN_1731507 83.0197 0.9090909
ILMN_1787689 109.5187 0.6805195
ILMN_3241953 489.5681 0
ILMN_1745607 126.999 0.3168831
ILMN_2136495 87.79374 0.864935
ILMN_1668111 121.5144 0.4337662
ILMN_2295559 133.7843 0.174026
ILMN_1735045 553.4698 0
ILMN_1680754 136.0409 0.1376623

Total number of rows: 47231

Table truncated, full table size 1361 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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