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Sample GSM61884 Query DataSets for GSM61884
Status Public on Aug 20, 2005
Title A3H1exp3
Sample type RNA
 
Channel 1
Source name A3H1exp3Cy3
Organism Mus musculus
Characteristics Channel1
1st hybridization
exp3
Treatment protocol exp3
liver CD3 negative/NK1.1 positive cells purified by magnetic cell sorting (MACS) followed by fluorescence activated cell sorting (FACS) with antibody and tetramer staining from naïve gene deficient Rag-/- knock-out (KO) mice
Extracted molecule total RNA
Label Cy3
 
Channel 2
Source name A3H1exp3Cy5
Organism Mus musculus
Characteristics Channel2
1st hybridization
exp3
Treatment protocol exp3
liver CD3 negative/NK1.1 positive cells purified by magnetic cell sorting (MACS) followed by fluorescence activated cell sorting (FACS) with antibody and tetramer staining from Listeria monocytogenes infected gene deficient Rag-/- knock-out (KO) mice
Extracted molecule total RNA
Label Cy5
 
 
Description hybridization on new microarray
Data processing Agilent FE7.5 / Rosetta Resover V5.0
 
Submission date Jun 20, 2005
Last update date Jun 23, 2005
Contact name Hans-Joachim Mollenkopf
E-mail(s) mollenkopf@mpiib-berlin.mpg.de
Phone +49 30 28460 482
Organization name Max-Planck-Institute for Infection Biology
Lab Microarray/Genomics Core Facility
Street address Charitéplatz 1
City Berlin
ZIP/Postal code 10117
Country Germany
 
Platform ID GPL1868
Series (1)
GSE2834 Agilent striptease

Data table header descriptions
ID_REF
Fold Change
P-value
Intensity1
Intensity2
Log(Intensity)
Ratio
VALUE
Log(Error)
X Dev
Sequence Name(s)
Sequence Code
Accession #
Sequence Description

Data table
ID_REF Fold Change P-value Intensity1 Intensity2 Log(Intensity) Ratio VALUE Log(Error) X Dev Sequence Name(s) Sequence Code Accession # Sequence Description
633390 1.21406 0.51515 148.02707 179.70433 2.20299 1.21406 0.08424 0.12943 0.65085 "Fprl1,Lxa4r,LXA4-R" NM_008042 NM_008042 formyl peptide receptor-like 1
633391 1.24855 0.06199 34431.30469 43831.10156 4.57396 1.24855 0.0964 0.05165 1.8664 "Tslpr,CRLM2,Ly114" NM_016715 NM_016715 "thymic stromal-derived lymphopoietin, receptor"
633392 1.27242 0.00759 13225.39062 16878.09961 4.16838 1.27242 0.10463 0.03919 2.66979 AI256499 AI256499 AI256499 "EST, Weakly similar to 0806162A ATPase 6 [M.musculus]"
633393 1.05964 0.80135 99207.00781 105122.9453 5.00912 1.05964 0.02516 0.1 0.2516 AI462013 AI462013 AI462013 "ESTs, Highly similar to HYPOTHETICAL 272.0 KD PROTEIN C50C3.6 IN CHROMOSOME III [Caenorhabditis elegans]"
633394 1.2021 0.64305 128.71051 158.08597 2.1355 1.2021 0.07994 0.17249 0.46344 AI662810 AI662810 AI662810 ESTs
633395 1.54829 0.06624 59.0787 91.11395 1.85931 1.54829 0.18985 0.10336 1.8368 Il9r NM_008374 NM_008374 interleukin 9 receptor
633396 1.03951 0.80629 290.20288 292.26144 2.45349 1.03951 0.01683 0.06864 0.24521 "Pcyt1a,Ctpct,CTalpha,Cttalpha" NM_009981 NM_009981 "phosphate cytidylyltransferase 1, choline, alpha isoform"
633397 1.11354 0.59582 380.34723 399.62445 2.57498 1.11354 0.04671 0.08805 0.53042 "Mtr,MS,D830038K18Rik" AI894170 AI894170 "ESTs, Moderately similar to 5-METHYLTETRAHYDROFOLATE--HOMOCYSTEINE METHYLTRANSFERASE [Escherichia coli]"
633398 1.04866 0.59957 106381.3359 111129.5469 5.02642 1.04866 0.02063 0.0393 0.52503 AW455556 AW455556 AW455556 "ESTs, Weakly similar to CG11399 gene product [D.melanogaster]"
633399 1.21195 0.12534 154.33824 187.09349 2.2299 1.21195 0.08348 0.05447 1.53275 "Ccl8,HC14,Mcp2,MCP-2,Scya8,1810063B20Rik" NM_021443 NM_021443 cDNA sequence AB023418
633400 -1.4885 0.00079 32639.60352 21503.69336 4.40729 0.67182 -0.17275 0.05148 -3.35565 AI451221 AI451221 AI451221 ESTs
633401 2.67362 9.36E-24 1448.96899 3893.40601 3.37067 2.67362 0.4271 0.04251 10.04815 AI448098 AI448098 AI448098 ESTs
633402 -1.4127 0.00276 1796.70874 1253.39844 3.16583 0.70786 -0.15005 0.05013 -2.9932 BE946070 BE946070 BE946070 "ESTs, Weakly similar to ORF YKL201c [S.cerevisiae]"
633403 1.95652 0.05194 87.62595 141.89493 1.95692 1.95652 0.29148 0.14997 1.9436 "Prkg1,CGKI,Prkg1b,Prkgr1b" NM_011160 NM_011160 "protein kinase, cGMP-dependent, type I"
633404 1.08964 0.29627 4241.58936 4620.30176 3.63654 1.08964 0.03729 0.0357 1.04446 BF456565 BF456565 BF456565 "ESTs, Weakly similar to putative membrane associated progesterone receptor component [M.musculus]"
633405 1.09227 0.6156 479.25153 513.33948 2.69121 1.09227 0.03833 0.07634 0.50209 "Htr1a,Gpcr18" NM_008308 NM_008308 5-hydroxytryptamine (serotonin) receptor 1A
633406 1.03976 0.67375 2232.4353 2310.14746 3.34611 1.03976 0.01693 0.04022 0.42101 "Jun,AP-1,Junc,c-jun" NM_010591 NM_010591 Jun oncogene
633407 1.43546 0.32494 158.52621 235.26688 2.26585 1.43546 0.15699 0.15949 0.98435 AV254337 AV254337 AV254337 "EST, Moderately similar to NEK1_MOUSE SERINE/THREONINE-PROTEIN KINASE NEK1 [M.musculus]"
633408 1.66136 3.50E-02 128.09789 210.45297 2.2004 1.66136 0.22046 0.10454 2.10892 "Oprd1,Nbor,mDOR,DOR-1" NM_013622 NM_013622 "opioid receptor, delta 1"
633409 -1.07055 0.46405 3790.96631 3519.72925 3.54751 0.9341 -0.02961 0.04043 -0.7322 AV374708 AV374708 AV374708 "ESTs, Highly similar to implantation-associated protein [R.norvegicus]"

Total number of rows: 8014

Table truncated, full table size 1228 Kbytes.




Supplementary data files not provided
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