|
Status |
Public on Oct 31, 2012 |
Title |
human bronchial epithelial cells from asthmatic donor 5 |
Sample type |
RNA |
|
|
Source name |
Primary bronchial epithelial cells
|
Organism |
Homo sapiens |
Characteristics |
cell type: Primary bronchial epithelial cells disease state: ashtma
|
Treatment protocol |
(Sigma). Embryos of the appropriate stage were manually selected under the dissecting scope. Selected embryos were transferred to a basket, rinsed with PBS with 0,7% NaCl, 0,04% triton-X100 and placed on ice in the Trizol solution (GibcoBRL).
|
Growth protocol |
HBECS were plated on transwells and grown at air-liquid interface
|
Extracted molecule |
total RNA |
Extraction protocol |
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
|
Label |
biotin
|
Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
|
|
|
Hybridization protocol |
Hybridization was perfomed according to manufacturers protocol.
|
Scan protocol |
GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
|
Description |
miRNA expression data
|
Data processing |
The data were analyzed with miRNA QC tool provided by Affymetrix.
|
|
|
Submission date |
Nov 09, 2010 |
Last update date |
Oct 31, 2012 |
Contact name |
Melanie J. Jardim |
E-mail(s) |
Jardim.Melanie@epa.gov
|
Phone |
919-966-7320
|
Fax |
919-966-6271
|
Organization name |
U.S. EPA
|
Department |
NHEERL
|
Lab |
EPHD
|
Street address |
104 Mason Farm Road
|
City |
Chapel Hill |
State/province |
NC |
ZIP/Postal code |
27514 |
Country |
USA |
|
|
Platform ID |
GPL8786 |
Series (1) |
GSE25230 |
microRNA expression data in bronchial epithelial cells from healthy and asthmatic donors |
|