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Sample GSM62207 Query DataSets for GSM62207
Status Public on Nov 02, 2006
Title 2004-11-24-CHC80-Chung-HumanX3P-Rep1
Sample type RNA
 
Source name HNSCC from FFPE block
Organism Homo sapiens
Characteristics HNSCC from FFPE block
Extracted molecule total RNA
Extraction protocol Arcturus Paradise kit
Label ENZO BioArray High Yield RNA Transcript Labeling Kit (Affymetrix, Santa Clara, CA)
 
Description HNSCC from FFPE block
Data processing quantile normalization of CEL file, GCRMA estimation of probesets, log2 transformation
 
Submission date Jun 24, 2005
Last update date Nov 02, 2006
Contact name Christine H. Chung
E-mail(s) christine.chung@vanderbilt.edu
Phone 615-322-4967
Fax 615343-7602
Organization name Vanderbilt University
Department Internal Medicine
Lab Chung
Street address 777 PRB
City Nashville
State/province TN
ZIP/Postal code 37232-6307
Country USA
 
Platform ID GPL1352
Series (1)
GSE2837 Survival Prediction of HNSCC using FFPE samples

Data table header descriptions
ID_REF probeset IDs from the human X3P array
VALUE Quantile normalization of CEL file, GCRMA probeset estimates, log2 transformation

Data table
ID_REF VALUE
Hs.145357.0.A1_3p_at 4.411354153
Hs.6523.1.A4_3p_at 3.252232619
Hs.184387.0.A1_3p_at 3.53885995
g13383475_3p_at 6.197809689
Hs.26045.1.S1_3p_s_at 3.43492148
Hs.17947.0.A1_3p_at 2.35674586
Hs2.382100.1.S1_3p_x_at 7.646904485
Hs.111323.0.S1_3p_at 3.775835769
Hs.302736.0.S1_3p_at 2.754516576
Hs.227806.0.S1_3p_a_at 3.111606785
Hs.301570.0.S1_3p_at 3.525061516
Hs.136313.0.S1_3p_at 3.560550527
Hs.198899.0.S1_3p_a_at 3.890319635
g9961356_3p_at 3.515124754
Hs.222127.0.A1_3p_at 2.687239659
Hs.283526.0.A1_3p_at 3.114368522
Hs.128425.0.S1_3p_a_at 3.819972447
g10835152_3p_x_at 4.823714923
Hs.22208.0.S1_3p_at 7.019130326
g7661625_3p_a_at 3.763635817

Total number of rows: 61358

Table truncated, full table size 1891 Kbytes.




Supplementary data files not provided

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