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Sample GSM62227 Query DataSets for GSM62227
Status Public on Nov 02, 2006
Title 2005-06-02-81CC2-Chung-HuX3P-Rep1
Sample type RNA
 
Source name frozen biopsy from HNSCC
Organism Homo sapiens
Characteristics frozen biopsy from HNSCC
Extracted molecule total RNA
Extraction protocol Arcturus Paradise kit
Label ENZO BioArray High Yield RNA Transcript Labeling Kit (Affymetrix, Santa Clara, CA)
 
Description frozen biopsy from HNSCC
Data processing quantile normalization of CEL file, GCRMA estimation of probesets, log2 transformation
 
Submission date Jun 24, 2005
Last update date Nov 02, 2006
Contact name Christine H. Chung
E-mail(s) christine.chung@vanderbilt.edu
Phone 615-322-4967
Fax 615343-7602
Organization name Vanderbilt University
Department Internal Medicine
Lab Chung
Street address 777 PRB
City Nashville
State/province TN
ZIP/Postal code 37232-6307
Country USA
 
Platform ID GPL1352
Series (1)
GSE2837 Survival Prediction of HNSCC using FFPE samples

Data table header descriptions
ID_REF probeset IDs from the human X3P array
VALUE Quantile normalization of CEL file, GCRMA probeset estimates, log2 transformation

Data table
ID_REF VALUE
Hs.145357.0.A1_3p_at 3.833951068
Hs.6523.1.A4_3p_at 4.023215468
Hs.184387.0.A1_3p_at 2.822516765
g13383475_3p_at 7.070314419
Hs.26045.1.S1_3p_s_at 3.01435298
Hs.17947.0.A1_3p_at 3.196881252
Hs2.382100.1.S1_3p_x_at 6.256525947
Hs.111323.0.S1_3p_at 5.054462713
Hs.302736.0.S1_3p_at 2.636027432
Hs.227806.0.S1_3p_a_at 4.14867801
Hs.301570.0.S1_3p_at 7.342544061
Hs.136313.0.S1_3p_at 2.839819692
Hs.198899.0.S1_3p_a_at 8.620167864
g9961356_3p_at 2.973316649
Hs.222127.0.A1_3p_at 2.972138026
Hs.283526.0.A1_3p_at 4.716816186
Hs.128425.0.S1_3p_a_at 3.876766898
g10835152_3p_x_at 6.602645344
Hs.22208.0.S1_3p_at 7.283154394
g7661625_3p_a_at 5.988516893

Total number of rows: 61358

Table truncated, full table size 1891 Kbytes.




Supplementary data files not provided

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