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Sample GSM62228 Query DataSets for GSM62228
Status Public on Nov 02, 2006
Title 2005-06-02-81CC3-Chung-HuX3P-Rep1
Sample type RNA
 
Source name HNSCC from FFPE block
Organism Homo sapiens
Characteristics HNSCC from FFPE block
Extracted molecule total RNA
Extraction protocol Arcturus Paradise kit
Label ENZO BioArray High Yield RNA Transcript Labeling Kit (Affymetrix, Santa Clara, CA)
 
Description HNSCC from FFPE block
Data processing quantile normalization of CEL file, GCRMA estimation of probesets, log2 transformation
 
Submission date Jun 24, 2005
Last update date Nov 02, 2006
Contact name Christine H. Chung
E-mail(s) christine.chung@vanderbilt.edu
Phone 615-322-4967
Fax 615343-7602
Organization name Vanderbilt University
Department Internal Medicine
Lab Chung
Street address 777 PRB
City Nashville
State/province TN
ZIP/Postal code 37232-6307
Country USA
 
Platform ID GPL1352
Series (1)
GSE2837 Survival Prediction of HNSCC using FFPE samples

Data table header descriptions
ID_REF probeset IDs from the human X3P array
VALUE Quantile normalization of CEL file, GCRMA probeset estimates, log2 transformation

Data table
ID_REF VALUE
Hs.145357.0.A1_3p_at 4.167770606
Hs.6523.1.A4_3p_at 3.18156018
Hs.184387.0.A1_3p_at 3.218862435
g13383475_3p_at 5.989974357
Hs.26045.1.S1_3p_s_at 3.393735092
Hs.17947.0.A1_3p_at 2.292553995
Hs2.382100.1.S1_3p_x_at 7.666305524
Hs.111323.0.S1_3p_at 5.969173927
Hs.302736.0.S1_3p_at 2.674306836
Hs.227806.0.S1_3p_a_at 3.018385154
Hs.301570.0.S1_3p_at 3.605256021
Hs.136313.0.S1_3p_at 3.314685779
Hs.198899.0.S1_3p_a_at 5.496891934
g9961356_3p_at 3.483887048
Hs.222127.0.A1_3p_at 2.851492608
Hs.283526.0.A1_3p_at 3.045440009
Hs.128425.0.S1_3p_a_at 4.01894697
g10835152_3p_x_at 4.946383924
Hs.22208.0.S1_3p_at 7.005315444
g7661625_3p_a_at 3.853068267

Total number of rows: 61358

Table truncated, full table size 1891 Kbytes.




Supplementary data files not provided

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