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Sample GSM630720 Query DataSets for GSM630720
Status Public on Jan 31, 2016
Title day 1 differentiated oligodendrocytes (rep 1)
Sample type RNA
 
Source name day 1 differentiated oligodendrocytes (rep 1)
Organism Rattus norvegicus
Characteristics sample type: Sprague-Dawley neonatal rat isolated oligodendrocytes
strain: Sprague-Dawley
cell type: oligodendrocytes
differentiation state: day 1 differentiated oligodendrocyte
Treatment protocol Oligodendrocyte progenitors were treated for 24 or 48 hrs with PD169316
Growth protocol Oligodendrocytes were isolated according to the protocol of McCarthy & De Vellis (PMID: 6248568)
Extracted molecule total RNA
Extraction protocol Extracted using the Qiagen Rneasy RNA extraction kit
Label Cy3
Label protocol Cy3 - according to Illumina manufacturer instructions CATALOG # BD-901-1002
 
Hybridization protocol according to Illumina manufacturer instructions
Scan protocol according to Illumina manufacturer instructions
Description SRD220
Data processing FlexArray Software (GenomeQuebec)
 
Submission date Nov 29, 2010
Last update date Jan 31, 2016
Contact name Guillermina Almazan
E-mail(s) guillermina.almazan@mcgill.ca
Phone 514-398-6222
Organization name McGill University
Department Pharmacology and Therapeutics
Street address 3655 Prom. Sir William Osler
City Montreal
State/province Quebec
ZIP/Postal code H3G 1Y6
Country Canada
 
Platform ID GPL6101
Series (1)
GSE25670 p38 regulated genes in rat myelinating glia

Data table header descriptions
ID_REF
VALUE average signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1369537 172.906 39 10.03864 0
ILMN_1358051 123.2019 43 5.663105 0.05795315
ILMN_1361746 105.814 34 5.556304 0.3637485
ILMN_1351370 118.1235 56 5.494424 0.108508
ILMN_1357910 299.8215 49 9.210253 0
ILMN_1352975 512.8275 34 25.81341 0
ILMN_1368384 107.8206 27 6.961778 0.3033292
ILMN_1355285 127.1099 49 5.313988 0.03329223
ILMN_1376898 124.8004 44 5.160353 0.04562269
ILMN_1368325 591.978 53 22.32849 0
ILMN_1353563 1547.9 42 48.42237 0
ILMN_1348794 78.23341 35 4.274555 0.9913687
ILMN_1364273 287.5834 44 11.04877 0
ILMN_1369433 150.5199 34 7.431839 0
ILMN_1349007 368.2044 56 10.08551 0
ILMN_1374156 120.4115 45 4.72437 0.07768188
ILMN_1360232 1632.403 43 46.45558 0
ILMN_1355155 6539.079 47 197.7899 0
ILMN_1362563 148.4754 45 5.731617 0
ILMN_1355815 127.3306 34 5.874758 0.03329223

Total number of rows: 22523

Table truncated, full table size 886 Kbytes.




Supplementary data files not provided
Processed data not provided for this record

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