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Sample GSM630723 Query DataSets for GSM630723
Status Public on Jan 31, 2016
Title day 1 differentiated oligodendrocytes + PD169 (rep 1)
Sample type RNA
 
Source name day 1 differentiated oligodendrocytes + PD169 (rep 1)
Organism Rattus norvegicus
Characteristics sample type: Sprague-Dawley neonatal rat isolated oligodendrocytes
strain: Sprague-Dawley
cell type: oligodendrocytes
differentiation state: day 1 differentiated oligodendrocyte
treatment: PD169316
Treatment protocol Oligodendrocyte progenitors were treated for 24 or 48 hrs with PD169316
Growth protocol Oligodendrocytes were isolated according to the protocol of McCarthy & De Vellis (PMID: 6248568)
Extracted molecule total RNA
Extraction protocol Extracted using the Qiagen Rneasy RNA extraction kit
Label Cy3
Label protocol Cy3 - according to Illumina manufacturer instructions CATALOG # BD-901-1002
 
Hybridization protocol according to Illumina manufacturer instructions
Scan protocol according to Illumina manufacturer instructions
Description SRD223
Data processing FlexArray Software (GenomeQuebec)
 
Submission date Nov 29, 2010
Last update date Jan 31, 2016
Contact name Guillermina Almazan
E-mail(s) guillermina.almazan@mcgill.ca
Phone 514-398-6222
Organization name McGill University
Department Pharmacology and Therapeutics
Street address 3655 Prom. Sir William Osler
City Montreal
State/province Quebec
ZIP/Postal code H3G 1Y6
Country Canada
 
Platform ID GPL6101
Series (1)
GSE25670 p38 regulated genes in rat myelinating glia

Data table header descriptions
ID_REF
VALUE average signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1369537 199.3743 47 9.16187 0
ILMN_1358051 152.8062 49 6.116752 0
ILMN_1361746 122.5979 46 5.741225 0.2145499
ILMN_1351370 122.6898 39 6.076864 0.2120838
ILMN_1357910 353.6342 39 14.32842 0
ILMN_1352975 396.5233 37 16.21691 0
ILMN_1368384 117.6 45 5.085171 0.324291
ILMN_1355285 127.7727 39 5.802541 0.1381011
ILMN_1376898 132.6083 52 3.99127 0.09124538
ILMN_1368325 670.0967 38 25.25938 0
ILMN_1353563 978.2453 34 31.40947 0
ILMN_1348794 89.72823 35 5.983497 0.9889026
ILMN_1364273 306.0869 38 11.21838 0
ILMN_1369433 164.7375 51 5.389411 0
ILMN_1349007 420.7641 49 17.02287 0
ILMN_1374156 134.7675 39 5.903512 0.07274969
ILMN_1360232 2552.837 42 59.41911 0
ILMN_1355155 6206.801 51 155.8058 0
ILMN_1362563 171.9563 59 6.916512 0
ILMN_1355815 145.9282 38 7.312058 0.01109741

Total number of rows: 22523

Table truncated, full table size 887 Kbytes.




Supplementary data files not provided
Processed data not provided for this record

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