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Sample GSM630724 Query DataSets for GSM630724
Status Public on Jan 31, 2016
Title day 1 differentiated oligodendrocytes + PD169 (rep 2)
Sample type RNA
 
Source name day 1 differentiated oligodendrocytes + PD169 (rep 2)
Organism Rattus norvegicus
Characteristics sample type: Sprague-Dawley neonatal rat isolated oligodendrocytes
strain: Sprague-Dawley
cell type: oligodendrocytes
differentiation state: day 1 differentiated oligodendrocyte
treatment: PD169316
Treatment protocol Oligodendrocyte progenitors were treated for 24 or 48 hrs with PD169316
Growth protocol Oligodendrocytes were isolated according to the protocol of McCarthy & De Vellis (PMID: 6248568)
Extracted molecule total RNA
Extraction protocol Extracted using the Qiagen Rneasy RNA extraction kit
Label Cy3
Label protocol Cy3 - according to Illumina manufacturer instructions CATALOG # BD-901-1002
 
Hybridization protocol according to Illumina manufacturer instructions
Scan protocol according to Illumina manufacturer instructions
Description SRD224
Data processing FlexArray Software (GenomeQuebec)
 
Submission date Nov 29, 2010
Last update date Jan 31, 2016
Contact name Guillermina Almazan
E-mail(s) guillermina.almazan@mcgill.ca
Phone 514-398-6222
Organization name McGill University
Department Pharmacology and Therapeutics
Street address 3655 Prom. Sir William Osler
City Montreal
State/province Quebec
ZIP/Postal code H3G 1Y6
Country Canada
 
Platform ID GPL6101
Series (1)
GSE25670 p38 regulated genes in rat myelinating glia

Data table header descriptions
ID_REF
VALUE average signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1369537 196.2627 36 10.48092 0
ILMN_1358051 138.2119 43 6.420794 0.009876544
ILMN_1361746 107.5003 46 4.726546 0.5197531
ILMN_1351370 119.6867 45 5.683224 0.1851852
ILMN_1357910 371.8369 39 13.51791 0
ILMN_1352975 408.759 40 16.24794 0
ILMN_1368384 116.6301 38 6.964241 0.245679
ILMN_1355285 131.9153 42 6.582045 0.04567901
ILMN_1376898 128.1987 29 7.74894 0.07407407
ILMN_1368325 716.6434 46 29.03769 0
ILMN_1353563 1020.172 39 33.48309 0
ILMN_1348794 82.59997 44 4.689623 0.9938272
ILMN_1364273 292.451 45 12.23608 0
ILMN_1369433 157.8593 49 5.710564 0
ILMN_1349007 441.0059 31 19.80643 0
ILMN_1374156 122.067 53 4.645876 0.1481481
ILMN_1360232 2613.417 40 83.76595 0
ILMN_1355155 6149.181 57 127.3833 0
ILMN_1362563 159.4279 55 5.948749 0
ILMN_1355815 124.2499 33 5.517485 0.1246914

Total number of rows: 22523

Table truncated, full table size 884 Kbytes.




Supplementary data files not provided
Processed data not provided for this record

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