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Sample GSM635257 Query DataSets for GSM635257
Status Public on Jan 01, 2012
Title estrus stage rep3
Sample type RNA
 
Source name mouse oviduct
Organism Mus musculus
Characteristics strain: ICR
age: 6 weeks
tissue: oviduct
developmental stage: estrus stage
Extracted molecule total RNA
Extraction protocol RNA was extracted, clean-up and DNase I treatment with QIAGEN RNeasy kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Dec 06, 2010
Last update date Jan 01, 2012
Contact name Chung-Hao Lu
E-mail(s) d95642001@ntu.edu.tw
Phone 886-2-28094661-2357
Organization name Mackay Memorial Hospital
Department Department of Medical Research
Lab Reproduction
Street address 92, Sec. 2, Zhongshan N. Rd
City Taipei
State/province Taipei
ZIP/Postal code 10449
Country Taiwan
 
Platform ID GPL6885
Series (1)
GSE25875 Gene expression profiles of the mouse oviduct during the estrous cycle

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1250052 8.681252 0.160401
ILMN_3122480 1.600066 0.4022556
ILMN_2599935 188.2005 0
ILMN_2675543 2.273321 0.3721805
ILMN_2686883 13.11679 0.0839599
ILMN_2751818 -2.172783 0.5839599
ILMN_2728634 43.52034 0
ILMN_3040515 6.077968 0.2393484
ILMN_2711608 72.78671 0
ILMN_1232875 -3.476992 0.6403509
ILMN_1258507 13.04237 0.08521304
ILMN_2746142 7.842923 0.1804511
ILMN_1252690 13.9362 0.07017544
ILMN_2655499 -1.26606 0.5350877
ILMN_1252870 -3.609976 0.6491228
ILMN_1248179 -2.453054 0.5964912
ILMN_2649955 72.23051 0
ILMN_2628708 18.98283 0.03132832
ILMN_3024781 8.13329 0.1679198
ILMN_2705628 10.27176 0.122807

Total number of rows: 25697

Table truncated, full table size 718 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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