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Sample GSM635259 Query DataSets for GSM635259
Status Public on Jan 01, 2012
Title diestrus stage rep3
Sample type RNA
 
Source name mouse oviduct
Organism Mus musculus
Characteristics strain: ICR
age: 6 weeks
tissue: oviduct
developmental stage: diestrus stage
Extracted molecule total RNA
Extraction protocol RNA was extracted, clean-up and DNase I treatment with QIAGEN RNeasy kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Dec 06, 2010
Last update date Jan 01, 2012
Contact name Chung-Hao Lu
E-mail(s) d95642001@ntu.edu.tw
Phone 886-2-28094661-2357
Organization name Mackay Memorial Hospital
Department Department of Medical Research
Lab Reproduction
Street address 92, Sec. 2, Zhongshan N. Rd
City Taipei
State/province Taipei
ZIP/Postal code 10449
Country Taiwan
 
Platform ID GPL6885
Series (1)
GSE25875 Gene expression profiles of the mouse oviduct during the estrous cycle

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1250052 0.4387825 0.443609
ILMN_3122480 -8.235451 0.8471178
ILMN_2599935 117.5761 0
ILMN_2675543 6.624918 0.2105263
ILMN_2686883 3.224725 0.3157895
ILMN_2751818 7.280476 0.1917293
ILMN_2728634 53.11036 0
ILMN_3040515 9.842169 0.112782
ILMN_2711608 83.11768 0
ILMN_1232875 -5.611514 0.7568922
ILMN_1258507 1.127099 0.406015
ILMN_2746142 -9.022682 0.8709273
ILMN_1252690 21.69055 0.01503759
ILMN_2655499 -8.738272 0.8621554
ILMN_1252870 6.753851 0.2092732
ILMN_1248179 -0.07216567 0.4636591
ILMN_2649955 59.0637 0
ILMN_2628708 13.47798 0.06015038
ILMN_3024781 1.808853 0.3696742
ILMN_2705628 2.258492 0.358396

Total number of rows: 25697

Table truncated, full table size 717 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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