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Sample GSM63679 Query DataSets for GSM63679
Status Public on Dec 21, 2005
Title DRG005_c
Sample type RNA
Source name dorsal root ganglion
Organism Mus musculus
Characteristics BALB/c
Treatment protocol normal standard housing conditions
Extracted molecule total RNA
Extraction protocol approximately 150 Laser Capture Microdissected neurons were put in RLT buffer.
Label biotin
Label protocol Approximately 12 microgram of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Laser captured visceral sensory neurons.
Data processing Affymetrix Microarray Suite version 5.0
Submission date Jul 11, 2005
Last update date Dec 21, 2005
Contact name Pieter Johan Peeters
Organization name J&J Pharmaceutical R&D
Department Internal Medicine
Street address Turnhoutseweg 30
City Beerse
ZIP/Postal code 2340
Country Belgium
Platform ID GPL1261
Series (1)
GSE2917 Profiling of visceral sensory neurons in dorsal root and nodose ganglia in BALB/c mice.

Data table header descriptions
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
AFFX-MUR_b2_at 181.9203623 P 0.001852
AFFX-MURINE_b1_at 419.9546776 P 0.000736
AFFX-MURINE_B2_at 6559.8139731 P 0.000030
AFFX-b-ActinMur/M12481_5_at 46.6660138 A 0.147939
AFFX-b-ActinMur/M12481_M_at 300.6588377 P 0.000052
AFFX-b-ActinMur/M12481_3_at 2558.5205910 P 0.000044
AFFX-GapdhMur/M32599_5_at 14.1320914 A 0.368438
AFFX-GapdhMur/M32599_M_at 243.2030179 P 0.000340
AFFX-GapdhMur/M32599_3_at 2673.4260922 P 0.000044
AFFX-TransRecMur/X57349_5_at 2.7768922 A 0.672921
AFFX-TransRecMur/X57349_M_at 4.1894481 A 0.686277
AFFX-TransRecMur/X57349_3_at 17.6832417 P 0.018281
AFFX-PyruCarbMur/L09192_5_at 46.9922863 A 0.123572
AFFX-PyruCarbMur/L09192_MA_at 72.9051083 P 0.020022
AFFX-PyruCarbMur/L09192_MB_at 6.4198211 A 0.834139
AFFX-PyruCarbMur/L09192_3_at 170.6086207 P 0.002023
AFFX-18SRNAMur/X00686_5_at 818.3221335 P 0.000044
AFFX-18SRNAMur/X00686_M_at 1062.2172344 P 0.000044
AFFX-18SRNAMur/X00686_3_at 379.8946696 P 0.000110
AFFX-DapX-5_at 9.6408953 A 0.205732

Total number of rows: 45101

Table truncated, full table size 1472 Kbytes.

Supplementary data files not provided

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