NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM63680 Query DataSets for GSM63680
Status Public on Dec 21, 2005
Title DRG003_c
Sample type RNA
 
Source name dorsal root ganglion
Organism Mus musculus
Characteristics BALB/c
Treatment protocol normal standard housing conditions
Extracted molecule total RNA
Extraction protocol approximately 150 Laser Capture Microdissected neurons were put in RLT buffer.
Label biotin
Label protocol Approximately 12 microgram of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Laser captured visceral sensory neurons.
Data processing Affymetrix Microarray Suite version 5.0
 
Submission date Jul 11, 2005
Last update date Dec 21, 2005
Contact name Pieter Johan Peeters
E-mail(s) ppeeter3@prdbe.jnj.com
Organization name J&J Pharmaceutical R&D
Department Internal Medicine
Street address Turnhoutseweg 30
City Beerse
ZIP/Postal code 2340
Country Belgium
 
Platform ID GPL1261
Series (1)
GSE2917 Profiling of visceral sensory neurons in dorsal root and nodose ganglia in BALB/c mice.

Data table header descriptions
ID_REF
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MUR_b2_at 326.2618038 P 0.000736
AFFX-MURINE_b1_at 710.8704069 P 0.000652
AFFX-MURINE_B2_at 7518.7102384 P 0.000030
AFFX-b-ActinMur/M12481_5_at 73.3329656 A 0.067678
AFFX-b-ActinMur/M12481_M_at 416.9544132 P 0.000052
AFFX-b-ActinMur/M12481_3_at 4350.2980802 P 0.000044
AFFX-GapdhMur/M32599_5_at 47.7284214 M 0.050214
AFFX-GapdhMur/M32599_M_at 587.9149882 P 0.000195
AFFX-GapdhMur/M32599_3_at 4908.1437532 P 0.000044
AFFX-TransRecMur/X57349_5_at 11.6402342 A 0.354453
AFFX-TransRecMur/X57349_M_at 1.7577129 A 0.953518
AFFX-TransRecMur/X57349_3_at 33.4784461 P 0.000509
AFFX-PyruCarbMur/L09192_5_at 54.6608186 A 0.083592
AFFX-PyruCarbMur/L09192_MA_at 50.9787908 A 0.116113
AFFX-PyruCarbMur/L09192_MB_at 6.3536312 A 0.843268
AFFX-PyruCarbMur/L09192_3_at 196.0273525 P 0.002867
AFFX-18SRNAMur/X00686_5_at 459.1029780 P 0.000044
AFFX-18SRNAMur/X00686_M_at 1109.5041324 P 0.000052
AFFX-18SRNAMur/X00686_3_at 521.9408066 P 0.000081
AFFX-DapX-5_at 10.3422001 A 0.175328

Total number of rows: 45101

Table truncated, full table size 1477 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap