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Sample GSM63690 Query DataSets for GSM63690
Status Public on Dec 21, 2005
Title NG015_c
Sample type RNA
Source name nodose ganglion
Organism Mus musculus
Characteristics BALB/c
Treatment protocol normal standard housing conditions
Extracted molecule total RNA
Extraction protocol approximately 150 Laser Capture Microdissected neurons were put in RLT buffer.
Label biotin
Label protocol Approximately 12 microgram of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Laser captured visceral sensory neurons.
Data processing Affymetrix Microarray Suite version 5.0
Submission date Jul 11, 2005
Last update date Dec 21, 2005
Contact name Pieter Johan Peeters
Organization name J&J Pharmaceutical R&D
Department Internal Medicine
Street address Turnhoutseweg 30
City Beerse
ZIP/Postal code 2340
Country Belgium
Platform ID GPL1261
Series (1)
GSE2917 Profiling of visceral sensory neurons in dorsal root and nodose ganglia in BALB/c mice.

Data table header descriptions
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
AFFX-MUR_b2_at 223.2005718 P 0.003533
AFFX-MURINE_b1_at 294.4512318 P 0.000933
AFFX-MURINE_B2_at 5098.0224088 P 0.000030
AFFX-b-ActinMur/M12481_5_at 65.4544289 A 0.067678
AFFX-b-ActinMur/M12481_M_at 424.8711883 P 0.000044
AFFX-b-ActinMur/M12481_3_at 2997.4690858 P 0.000044
AFFX-GapdhMur/M32599_5_at 38.9076825 P 0.026111
AFFX-GapdhMur/M32599_M_at 486.6463473 P 0.000110
AFFX-GapdhMur/M32599_3_at 3738.1175573 P 0.000044
AFFX-TransRecMur/X57349_5_at 12.1724073 A 0.262809
AFFX-TransRecMur/X57349_M_at 1.4979734 A 0.921998
AFFX-TransRecMur/X57349_3_at 18.7263315 P 0.012547
AFFX-PyruCarbMur/L09192_5_at 47.9235406 A 0.131361
AFFX-PyruCarbMur/L09192_MA_at 42.6028495 A 0.078002
AFFX-PyruCarbMur/L09192_MB_at 9.1768952 A 0.737173
AFFX-PyruCarbMur/L09192_3_at 246.4148348 P 0.000297
AFFX-18SRNAMur/X00686_5_at 174.6456098 P 0.000070
AFFX-18SRNAMur/X00686_M_at 546.1150525 P 0.000070
AFFX-18SRNAMur/X00686_3_at 344.3247985 P 0.000147
AFFX-DapX-5_at 10.9581860 M 0.054213

Total number of rows: 45101

Table truncated, full table size 1474 Kbytes.

Supplementary data files not provided

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