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Sample GSM63692 Query DataSets for GSM63692
Status Public on Dec 21, 2005
Title NG001_c
Sample type RNA
Source name nodose ganglion
Organism Mus musculus
Characteristics BALB/c
Treatment protocol normal standard housing conditions
Extracted molecule total RNA
Extraction protocol approximately 150 Laser Capture Microdissected neurons were put in RLT buffer.
Label biotin
Label protocol Approximately 12 microgram of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Laser captured visceral sensory neurons.
Data processing Affymetrix Microarray Suite version 5.0
Submission date Jul 11, 2005
Last update date Dec 21, 2005
Contact name Pieter Johan Peeters
Organization name J&J Pharmaceutical R&D
Department Internal Medicine
Street address Turnhoutseweg 30
City Beerse
ZIP/Postal code 2340
Country Belgium
Platform ID GPL1261
Series (1)
GSE2917 Profiling of visceral sensory neurons in dorsal root and nodose ganglia in BALB/c mice.

Data table header descriptions
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
AFFX-MUR_b2_at 306.0350193 P 0.001852
AFFX-MURINE_b1_at 526.2681454 P 0.000652
AFFX-MURINE_B2_at 6788.5805425 P 0.000030
AFFX-b-ActinMur/M12481_5_at 81.8847604 M 0.046482
AFFX-b-ActinMur/M12481_M_at 827.6241675 P 0.000044
AFFX-b-ActinMur/M12481_3_at 4577.4264045 P 0.000044
AFFX-GapdhMur/M32599_5_at 59.2262916 P 0.003595
AFFX-GapdhMur/M32599_M_at 776.6407042 P 0.000070
AFFX-GapdhMur/M32599_3_at 5145.7272279 P 0.000044
AFFX-TransRecMur/X57349_5_at 2.5955204 A 0.617401
AFFX-TransRecMur/X57349_M_at 27.8678219 A 0.216524
AFFX-TransRecMur/X57349_3_at 17.1019553 P 0.033677
AFFX-PyruCarbMur/L09192_5_at 78.1495853 M 0.050229
AFFX-PyruCarbMur/L09192_MA_at 53.9905573 M 0.042962
AFFX-PyruCarbMur/L09192_MB_at 7.7664514 A 0.883887
AFFX-PyruCarbMur/L09192_3_at 465.0041853 P 0.000095
AFFX-18SRNAMur/X00686_5_at 771.2920891 P 0.000044
AFFX-18SRNAMur/X00686_M_at 1871.0924602 P 0.000044
AFFX-18SRNAMur/X00686_3_at 556.1004476 P 0.000081
AFFX-DapX-5_at 15.4811233 M 0.050229

Total number of rows: 45101

Table truncated, full table size 1477 Kbytes.

Supplementary data files not provided

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