GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM63694 Query DataSets for GSM63694
Status Public on Dec 21, 2005
Title NG008_c
Sample type RNA
Source name nodose ganglion
Organism Mus musculus
Characteristics BALB/c
Treatment protocol normal standard housing conditions
Extracted molecule total RNA
Extraction protocol approximately 150 Laser Capture Microdissected neurons were put in RLT buffer.
Label biotin
Label protocol Approximately 12 microgram of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Laser captured visceral sensory neurons.
Data processing Affymetrix Microarray Suite version 5.0
Submission date Jul 11, 2005
Last update date Dec 21, 2005
Contact name Pieter Johan Peeters
Organization name J&J Pharmaceutical R&D
Department Internal Medicine
Street address Turnhoutseweg 30
City Beerse
ZIP/Postal code 2340
Country Belgium
Platform ID GPL1261
Series (1)
GSE2917 Profiling of visceral sensory neurons in dorsal root and nodose ganglia in BALB/c mice.

Data table header descriptions
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
AFFX-MUR_b2_at 268.0883617 P 0.001178
AFFX-MURINE_b1_at 614.7453521 P 0.000736
AFFX-MURINE_B2_at 5756.7114833 P 0.000030
AFFX-b-ActinMur/M12481_5_at 51.0724414 A 0.123572
AFFX-b-ActinMur/M12481_M_at 437.5783525 P 0.000044
AFFX-b-ActinMur/M12481_3_at 3618.5529145 P 0.000044
AFFX-GapdhMur/M32599_5_at 37.3703913 P 0.009337
AFFX-GapdhMur/M32599_M_at 378.0754663 P 0.000110
AFFX-GapdhMur/M32599_3_at 4082.0152491 P 0.000044
AFFX-TransRecMur/X57349_5_at 3.2732581 A 0.588620
AFFX-TransRecMur/X57349_M_at 1.9788806 A 0.966323
AFFX-TransRecMur/X57349_3_at 27.1065157 P 0.008440
AFFX-PyruCarbMur/L09192_5_at 39.3939027 A 0.185131
AFFX-PyruCarbMur/L09192_MA_at 53.4933786 P 0.033677
AFFX-PyruCarbMur/L09192_MB_at 4.3382495 A 0.843268
AFFX-PyruCarbMur/L09192_3_at 182.8528528 P 0.002023
AFFX-18SRNAMur/X00686_5_at 482.5644789 P 0.000052
AFFX-18SRNAMur/X00686_M_at 1101.7849802 P 0.000044
AFFX-18SRNAMur/X00686_3_at 506.0387831 P 0.000060
AFFX-DapX-5_at 7.0224530 A 0.313723

Total number of rows: 45101

Table truncated, full table size 1471 Kbytes.

Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap