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Sample GSM63843 Query DataSets for GSM63843
Status Public on Dec 10, 2017
Title Traced_MM15 high yield replicate
Sample type RNA
 
Source name Laser captured spinal cord neurons
Organism Rattus norvegicus
Characteristics Adult female Fischer 344
Biomaterial provider Lawrence Moon
Treatment protocol Cut 10um transverse cryosections of unfixed spinal cord, dehydrate, laser capture
Growth protocol n/a
Extracted molecule total RNA
Extraction protocol PicoPure (version C), Arcturus
Label Biotin
Label protocol Three round Eberwine amplification, proprietary modified Message Amp using BioArray High Yield labeling kit (Enzo) in last round.
 
Hybridization protocol Standard Affymetrix procedure for fragmentation and hybridization
Scan protocol Standard GCOS scanning, GeneChip Scanner 3000
Description Identification of genes associated with axotomy or regeneration in the CNS.
Data processing GCOS, scaled to 200
 
Submission date Jul 12, 2005
Last update date Dec 10, 2017
Contact name Lawrence DF Moon
E-mail(s) lawrence.moon@kcl.ac.uk
Organization name King's College London
Department Wolfson Centre for Age-Related Diseases
Lab Moon team
Street address 16 - 18 Newcomen Street
City London
ZIP/Postal code SE11UL
Country United Kingdom
 
Platform ID GPL1355
Series (1)
GSE2925 Identification of genes expressed by spinal cord neurons after axotomy and during axon regeneration

Data table header descriptions
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 276.2 P 0.000754
AFFX-BioB-M_at 605.2 P 0.000052
AFFX-BioB-3_at 568.8 P 0.000052
AFFX-BioC-5_at 1828.9 P 0.000044
AFFX-BioC-3_at 1315.4 P 0.000044
AFFX-BioDn-5_at 3050.6 P 0.000044
AFFX-BioDn-3_at 6742.2 P 0.000044
AFFX-CreX-5_at 14321 P 0.000052
AFFX-CreX-3_at 13074.8 P 0.000044
AFFX-DapX-5_at 1228.7 P 0.000052
AFFX-DapX-M_at 1843 P 0.00007
AFFX-DapX-3_at 1852.7 P 0.000044
AFFX-LysX-5_at 898.5 P 0.000044
AFFX-LysX-M_at 1309.2 P 0.000052
AFFX-LysX-3_at 1984.7 P 0.000044
AFFX-PheX-5_at 1838.3 P 0.000052
AFFX-PheX-M_at 2109.2 P 0.000044
AFFX-PheX-3_at 1730.3 P 0.000044
AFFX-ThrX-5_at 1842.7 P 0.000044
AFFX-ThrX-M_at 1556.7 P 0.000044

Total number of rows: 31099

Table truncated, full table size 820 Kbytes.




Supplementary file Size Download File type/resource
GSM63843.CEL.gz 4.4 Mb (ftp)(http) CEL

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