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Sample GSM642947 Query DataSets for GSM642947
Status Public on Nov 01, 2011
Title Ovarian carcinoma 15
Sample type RNA
 
Source name Ovarian carcinoma 15
Organism Homo sapiens
Characteristics histological type: Serous
grade: 3
Stage: IV
tissue: ovarian carcinoma tumor
os event: 0
os time (years): 4.62423
pfs event: 0
pfs time (years): 4.62423
signature: FIBROSIS
Extracted molecule total RNA
Extraction protocol Total RNA purification was conducted using miRNeasy kit
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 plus 2,0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Affymetrix 7G Scanner GCS3000
Description Gene expression data from ovarian carcinoma
Data processing The data were analyzed with Partek software (6.10.0915 version)
 
Submission date Dec 20, 2010
Last update date Aug 19, 2014
Contact name Fatima Mechta-Grigoriou
E-mail(s) fatima.mechta-grigoriou@curie.fr
Phone +33156246653
Fax +33156246650
Organization name Institut Curie
Department INSERM U830
Lab "Stress and Cancer" Lab.
Street address 26 rue d'Ulm
City PARIS
ZIP/Postal code 75248
Country France
 
Platform ID GPL570
Series (1)
GSE26193 Control of oxidative stress by miRNA and impact on ovarian tumorigenesis

Data table header descriptions
ID_REF
VALUE GC-RMA signal intensities

Data table
ID_REF VALUE
1007_s_at 10.0402
1053_at 7.23965
117_at 6.0823
121_at 9.9611
1255_g_at 2.45341
1294_at 6.29497
1316_at 3.24936
1320_at 2.34172
1405_i_at 7.14292
1431_at 2.63863
1438_at 6.89161
1487_at 6.2802
1494_f_at 2.29505
1552256_a_at 6.62912
1552257_a_at 8.19445
1552258_at 2.60962
1552261_at 6.18034
1552263_at 5.18668
1552264_a_at 7.14499
1552266_at 3.0658

Total number of rows: 54675

Table truncated, full table size 998 Kbytes.




Supplementary file Size Download File type/resource
GSM642947_OC01_ARN0023_s1h1s1_U133p2.CEL.gz 4.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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