NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM642963 Query DataSets for GSM642963
Status Public on Nov 01, 2011
Title Ovarian carcinoma 31
Sample type RNA
 
Source name Ovarian carcinoma 31
Organism Homo sapiens
Characteristics histological type: Mucinous
grade: 1
Stage: Ia
tissue: ovarian carcinoma tumor
os event: 0
os time (years): 6.51061
pfs event: 0
pfs time (years): 6.51061
signature: STRESS
Extracted molecule total RNA
Extraction protocol Total RNA purification was conducted using miRNeasy kit
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 plus 2,0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Affymetrix 7G Scanner GCS3000
Description Gene expression data from ovarian carcinoma
Data processing The data were analyzed with Partek software (6.10.0915 version)
 
Submission date Dec 20, 2010
Last update date Aug 19, 2014
Contact name Fatima Mechta-Grigoriou
E-mail(s) fatima.mechta-grigoriou@curie.fr
Phone +33156246653
Fax +33156246650
Organization name Institut Curie
Department INSERM U830
Lab "Stress and Cancer" Lab.
Street address 26 rue d'Ulm
City PARIS
ZIP/Postal code 75248
Country France
 
Platform ID GPL570
Series (1)
GSE26193 Control of oxidative stress by miRNA and impact on ovarian tumorigenesis

Data table header descriptions
ID_REF
VALUE GC-RMA signal intensities

Data table
ID_REF VALUE
1007_s_at 10.6376
1053_at 6.34763
117_at 4.57811
121_at 9.32501
1255_g_at 2.49814
1294_at 7.54423
1316_at 3.1756
1320_at 2.25522
1405_i_at 6.29091
1431_at 2.70168
1438_at 3.0205
1487_at 5.95179
1494_f_at 2.58612
1552256_a_at 6.88546
1552257_a_at 8.73702
1552258_at 2.9177
1552261_at 6.81506
1552263_at 5.20949
1552264_a_at 5.96841
1552266_at 3.14138

Total number of rows: 54675

Table truncated, full table size 998 Kbytes.




Supplementary file Size Download File type/resource
GSM642963_OC01_ARN0042_s1h1s1_U133p2.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap