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Sample GSM642991 Query DataSets for GSM642991
Status Public on Nov 01, 2011
Title Ovarian carcinoma 59
Sample type RNA
 
Source name Ovarian carcinoma 59
Organism Homo sapiens
Characteristics histological type: Serous
grade: 3
Stage: IIIc
tissue: ovarian carcinoma tumor
os event: 0
os time (years): 5.02122
pfs event: 1
pfs time (years): 2.87474
signature: FIBROSIS
Extracted molecule total RNA
Extraction protocol Total RNA purification was conducted using miRNeasy kit
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 plus 2,0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Affymetrix 7G Scanner GCS3000
Description Gene expression data from ovarian carcinoma
Data processing The data were analyzed with Partek software (6.10.0915 version)
 
Submission date Dec 20, 2010
Last update date Aug 19, 2014
Contact name Fatima Mechta-Grigoriou
E-mail(s) fatima.mechta-grigoriou@curie.fr
Phone +33156246653
Fax +33156246650
Organization name Institut Curie
Department INSERM U830
Lab "Stress and Cancer" Lab.
Street address 26 rue d'Ulm
City PARIS
ZIP/Postal code 75248
Country France
 
Platform ID GPL570
Series (1)
GSE26193 Control of oxidative stress by miRNA and impact on ovarian tumorigenesis

Data table header descriptions
ID_REF
VALUE GC-RMA signal intensities

Data table
ID_REF VALUE
1007_s_at 9.22181
1053_at 6.90321
117_at 4.44689
121_at 10.5899
1255_g_at 2.39917
1294_at 6.54921
1316_at 3.26166
1320_at 3.12761
1405_i_at 6.63682
1431_at 2.72345
1438_at 7.12882
1487_at 6.20233
1494_f_at 2.50865
1552256_a_at 5.57809
1552257_a_at 8.13043
1552258_at 2.58459
1552261_at 3.74356
1552263_at 6.78641
1552264_a_at 7.89399
1552266_at 3.13097

Total number of rows: 54675

Table truncated, full table size 998 Kbytes.




Supplementary file Size Download File type/resource
GSM642991_OC01_ARN0093_s1h1s1_U133p2.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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