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Sample GSM643003 Query DataSets for GSM643003
Status Public on Nov 01, 2011
Title Ovarian carcinoma 71
Sample type RNA
 
Source name Ovarian carcinoma 71
Organism Homo sapiens
Characteristics histological type: Endometrioid
grade: 1
Stage: IIa
tissue: ovarian carcinoma tumor
os event: 0
os time (years): 4.75565
pfs event: 0
pfs time (years): 4.75565
signature: FIBROSIS
Extracted molecule total RNA
Extraction protocol Total RNA purification was conducted using miRNeasy kit
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 plus 2,0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Affymetrix 7G Scanner GCS3000
Description Gene expression data from ovarian carcinoma
Data processing The data were analyzed with Partek software (6.10.0915 version)
 
Submission date Dec 20, 2010
Last update date Aug 19, 2014
Contact name Fatima Mechta-Grigoriou
E-mail(s) fatima.mechta-grigoriou@curie.fr
Phone +33156246653
Fax +33156246650
Organization name Institut Curie
Department INSERM U830
Lab "Stress and Cancer" Lab.
Street address 26 rue d'Ulm
City PARIS
ZIP/Postal code 75248
Country France
 
Platform ID GPL570
Series (1)
GSE26193 Control of oxidative stress by miRNA and impact on ovarian tumorigenesis

Data table header descriptions
ID_REF
VALUE GC-RMA signal intensities

Data table
ID_REF VALUE
1007_s_at 10.2919
1053_at 6.97652
117_at 3.35626
121_at 8.41032
1255_g_at 2.41874
1294_at 6.08902
1316_at 3.24764
1320_at 2.49884
1405_i_at 3.64014
1431_at 3.65899
1438_at 7.66859
1487_at 5.70345
1494_f_at 2.32769
1552256_a_at 9.78245
1552257_a_at 8.03288
1552258_at 2.67165
1552261_at 4.17732
1552263_at 4.81293
1552264_a_at 6.93539
1552266_at 3.08458

Total number of rows: 54675

Table truncated, full table size 998 Kbytes.




Supplementary file Size Download File type/resource
GSM643003_OC01_ARN0113_s1h1s1_U133p2.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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