NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM643018 Query DataSets for GSM643018
Status Public on Nov 01, 2011
Title Ovarian carcinoma 86
Sample type RNA
 
Source name Ovarian carcinoma 86
Organism Homo sapiens
Characteristics histological type: Clear Cells
grade: 2
Stage: Ia
tissue: ovarian carcinoma tumor
os event: 0
os time (years): 7.72348
pfs event: 0
pfs time (years): 7.72348
signature: STRESS
Extracted molecule total RNA
Extraction protocol Total RNA purification was conducted using miRNeasy kit
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 plus 2,0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Affymetrix 7G Scanner GCS3000
Description Gene expression data from ovarian carcinoma
Data processing The data were analyzed with Partek software (6.10.0915 version)
 
Submission date Dec 20, 2010
Last update date Aug 19, 2014
Contact name Fatima Mechta-Grigoriou
E-mail(s) fatima.mechta-grigoriou@curie.fr
Phone +33156246653
Fax +33156246650
Organization name Institut Curie
Department INSERM U830
Lab "Stress and Cancer" Lab.
Street address 26 rue d'Ulm
City PARIS
ZIP/Postal code 75248
Country France
 
Platform ID GPL570
Series (1)
GSE26193 Control of oxidative stress by miRNA and impact on ovarian tumorigenesis

Data table header descriptions
ID_REF
VALUE GC-RMA signal intensities

Data table
ID_REF VALUE
1007_s_at 9.04269
1053_at 6.99322
117_at 2.98748
121_at 10.956
1255_g_at 2.42792
1294_at 6.31544
1316_at 3.24104
1320_at 2.35749
1405_i_at 3.40891
1431_at 3.00947
1438_at 3.70123
1487_at 5.75938
1494_f_at 2.56221
1552256_a_at 8.06055
1552257_a_at 8.57727
1552258_at 2.64774
1552261_at 4.79412
1552263_at 5.13906
1552264_a_at 6.15836
1552266_at 3.17927

Total number of rows: 54675

Table truncated, full table size 998 Kbytes.




Supplementary file Size Download File type/resource
GSM643018_OC01_ARN0134_s1h1s1_U133p2.CEL.gz 4.2 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap