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Sample GSM643022 Query DataSets for GSM643022
Status Public on Nov 01, 2011
Title Ovarian carcinoma 90
Sample type RNA
 
Source name Ovarian carcinoma 90
Organism Homo sapiens
Characteristics histological type: Serous
grade: 3
Stage: IIc
tissue: ovarian carcinoma tumor
os event: 0
os time (years): 5.859
pfs event: 1
pfs time (years): 4.06023
signature: STRESS
Extracted molecule total RNA
Extraction protocol Total RNA purification was conducted using miRNeasy kit
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 plus 2,0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Affymetrix 7G Scanner GCS3000
Description Gene expression data from ovarian carcinoma
Data processing The data were analyzed with Partek software (6.10.0915 version)
 
Submission date Dec 20, 2010
Last update date Aug 19, 2014
Contact name Fatima Mechta-Grigoriou
E-mail(s) fatima.mechta-grigoriou@curie.fr
Phone +33156246653
Fax +33156246650
Organization name Institut Curie
Department INSERM U830
Lab "Stress and Cancer" Lab.
Street address 26 rue d'Ulm
City PARIS
ZIP/Postal code 75248
Country France
 
Platform ID GPL570
Series (1)
GSE26193 Control of oxidative stress by miRNA and impact on ovarian tumorigenesis

Data table header descriptions
ID_REF
VALUE GC-RMA signal intensities

Data table
ID_REF VALUE
1007_s_at 11.4008
1053_at 7.48157
117_at 6.55183
121_at 9.36208
1255_g_at 2.44988
1294_at 7.82424
1316_at 3.32535
1320_at 2.36026
1405_i_at 5.6859
1431_at 2.68393
1438_at 3.33847
1487_at 6.17189
1494_f_at 2.36591
1552256_a_at 6.91228
1552257_a_at 8.38468
1552258_at 2.73605
1552261_at 5.62852
1552263_at 4.72838
1552264_a_at 5.8425
1552266_at 3.05739

Total number of rows: 54675

Table truncated, full table size 998 Kbytes.




Supplementary file Size Download File type/resource
GSM643022_OC01_ARN0138_s1h1s1_U133p2.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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