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Sample GSM643026 Query DataSets for GSM643026
Status Public on Nov 01, 2011
Title Ovarian carcinoma 94
Sample type RNA
 
Source name Ovarian carcinoma 94
Organism Homo sapiens
Characteristics histological type: Serous
grade: 3
Stage: IIIc
tissue: ovarian carcinoma tumor
os event: 1
os time (years): 3.1102
pfs event: 1
pfs time (years): 1.56879
signature: STRESS
Extracted molecule total RNA
Extraction protocol Total RNA purification was conducted using miRNeasy kit
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 plus 2,0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Affymetrix 7G Scanner GCS3000
Description Gene expression data from ovarian carcinoma
Data processing The data were analyzed with Partek software (6.10.0915 version)
 
Submission date Dec 20, 2010
Last update date Aug 19, 2014
Contact name Fatima Mechta-Grigoriou
E-mail(s) fatima.mechta-grigoriou@curie.fr
Phone +33156246653
Fax +33156246650
Organization name Institut Curie
Department INSERM U830
Lab "Stress and Cancer" Lab.
Street address 26 rue d'Ulm
City PARIS
ZIP/Postal code 75248
Country France
 
Platform ID GPL570
Series (1)
GSE26193 Control of oxidative stress by miRNA and impact on ovarian tumorigenesis

Data table header descriptions
ID_REF
VALUE GC-RMA signal intensities

Data table
ID_REF VALUE
1007_s_at 10.5751
1053_at 6.69162
117_at 4.35972
121_at 8.71907
1255_g_at 2.4676
1294_at 9.00757
1316_at 3.3258
1320_at 2.30338
1405_i_at 7.22489
1431_at 2.87198
1438_at 2.94753
1487_at 6.74094
1494_f_at 2.40291
1552256_a_at 6.2252
1552257_a_at 9.06914
1552258_at 2.63061
1552261_at 7.51884
1552263_at 4.52121
1552264_a_at 5.94543
1552266_at 5.11796

Total number of rows: 54675

Table truncated, full table size 998 Kbytes.




Supplementary file Size Download File type/resource
GSM643026_OC01_ARN0149_s1h1s1_U133p2.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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