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Sample GSM643035 Query DataSets for GSM643035
Status Public on Nov 01, 2011
Title Ovarian carcinoma 103
Sample type RNA
 
Source name Ovarian carcinoma 103
Organism Homo sapiens
Characteristics histological type: Serous
grade: 3
Stage: IV
tissue: ovarian carcinoma tumor
os event: 1
os time (years): 2.65845
pfs event: 1
pfs time (years): 1.88364
signature: FIBROSIS
Extracted molecule total RNA
Extraction protocol Total RNA purification was conducted using miRNeasy kit
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip U133 plus 2,0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Affymetrix 7G Scanner GCS3000
Description Gene expression data from ovarian carcinoma
Data processing The data were analyzed with Partek software (6.10.0915 version)
 
Submission date Dec 20, 2010
Last update date Aug 19, 2014
Contact name Fatima Mechta-Grigoriou
E-mail(s) fatima.mechta-grigoriou@curie.fr
Phone +33156246653
Fax +33156246650
Organization name Institut Curie
Department INSERM U830
Lab "Stress and Cancer" Lab.
Street address 26 rue d'Ulm
City PARIS
ZIP/Postal code 75248
Country France
 
Platform ID GPL570
Series (1)
GSE26193 Control of oxidative stress by miRNA and impact on ovarian tumorigenesis

Data table header descriptions
ID_REF
VALUE GC-RMA signal intensities

Data table
ID_REF VALUE
1007_s_at 10.9687
1053_at 7.2571
117_at 4.77785
121_at 8.7586
1255_g_at 2.42612
1294_at 6.8002
1316_at 3.1449
1320_at 2.36307
1405_i_at 6.56967
1431_at 2.833
1438_at 6.52751
1487_at 6.31246
1494_f_at 2.37268
1552256_a_at 6.336
1552257_a_at 7.95938
1552258_at 4.423
1552261_at 4.35453
1552263_at 5.98728
1552264_a_at 7.18985
1552266_at 3.00544

Total number of rows: 54675

Table truncated, full table size 998 Kbytes.




Supplementary file Size Download File type/resource
GSM643035_OC01_ARN0161_s1h1s1_U133p2.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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