|
Status |
Public on Sep 19, 2022 |
Title |
SnRNAseq of striatum from SPF mice post exercise replicate 1 |
Sample type |
SRA |
|
|
Source name |
Striatum
|
Organism |
Mus musculus |
Characteristics |
tissue: Striatum genotype: C57BL/6 treatment: Post exercise without antibiotics treatment
|
Extracted molecule |
polyA RNA |
Extraction protocol |
Nuclei were isolated as described in manuscript, sorted based on DAPI positivity, and loaded into 10X Genomics platform 10X Genomics according to manufacturers protocol
|
|
|
Library strategy |
RNA-Seq |
Library source |
transcriptomic |
Library selection |
cDNA |
Instrument model |
NextSeq 550 |
|
|
Data processing |
Cellranger v3 Supplementary files format and content: mm10 Supplementary files format and content: matrix, barcodes, and gene files
|
|
|
Submission date |
Aug 10, 2022 |
Last update date |
Sep 21, 2022 |
Contact name |
Patrick Lundgren |
E-mail(s) |
r.patricklundgren@gmail.com
|
Organization name |
University of Pennsylvania
|
Street address |
302 Johnson Pavilion, 3610 Hamilton Walk
|
City |
Philadelphia |
State/province |
PA |
ZIP/Postal code |
19104 |
Country |
USA |
|
|
Platform ID |
GPL21626 |
Series (1) |
GSE210906 |
A microbiome-dependent gut–brain pathway regulates motivation for exercise |
|
Relations |
BioSample |
SAMN30237318 |
SRA |
SRX17019984 |