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Sample GSM67110 Query DataSets for GSM67110
Status Public on Aug 06, 2005
Title Arabidopsis_Seedling03
Sample type RNA
 
Source name plant
Organism Arabidopsis thaliana
Characteristics Landsberg erecta (Ler)
Growth protocol Seedling tissue was collected by growing Ler seedlings on Murashige and Skoog media plates for 10 days, and whole seedlings were harvested for RNA.
Extracted molecule total RNA
Label Bioarray High Yield RNA Transcript Labeling Kit
 
Description Seedling tissue was collected by growing Ler seedlings on Murashige and Skoog media plates for 10 days, and whole seedlings were harvested for RNA.
Data processing statistical averaging of probes using Affymetrix software
 
Submission date Aug 04, 2005
Last update date Aug 28, 2018
Contact name Daphne Preuss
E-mail(s) dpreuss@midway.uchicago.edu, rob.swanson@valpo.edu, tclark@ittc.ku.edu
Organization name The University of Chicago
Department Molecular Genetics and Cell Biology
Street address 1103 E. 57th Street
City Chicago
State/province IL
ZIP/Postal code 66037
Country USA
 
Platform ID GPL198
Series (1)
GSE3056 Arabidopsis Pollination Study
Relations
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE expression value determined from probe set
ABS_CALL present (P) or absent (A)
DETECTION P-VALUE for present call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 238.4 P 0.006187
AFFX-BioB-M_at 282.3 P 0.000070
AFFX-BioB-3_at 173.2 P 0.000446
AFFX-BioC-5_at 628.2 P 0.000127
AFFX-BioC-3_at 233.3 P 0.000340
AFFX-BioDn-5_at 600.9 P 0.000044
AFFX-BioDn-3_at 3165.2 P 0.000060
AFFX-CreX-5_at 6316.0 P 0.000052
AFFX-CreX-3_at 7930.5 P 0.000044
AFFX-DapX-5_at 22.4 A 0.108979
AFFX-DapX-M_at 33.5 A 0.123572
AFFX-DapX-3_at 20.0 A 0.868639
AFFX-LysX-5_at 14.0 A 0.368438
AFFX-LysX-M_at 4.8 A 0.876428
AFFX-LysX-3_at 7.3 A 0.514890
AFFX-PheX-5_at 8.7 A 0.749204
AFFX-PheX-M_at 4.6 A 0.834139
AFFX-PheX-3_at 14.6 A 0.686277
AFFX-ThrX-5_at 10.0 A 0.617401
AFFX-ThrX-M_at 6.2 A 0.712257

Total number of rows: 22810

Table truncated, full table size 599 Kbytes.




Supplementary file Size Download File type/resource
GSM67110.cel.gz 3.4 Mb (ftp)(http) CEL
GSM67110.chp.gz 6.0 Mb (ftp)(http) CHP
GSM67110.dat.gz 27.3 Mb (ftp)(http) DAT
GSM67110.exp.gz 505 b (ftp)(http) EXP
GSM67110.rpt.gz 914 b (ftp)(http) RPT
Processed data provided as supplementary file

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