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GEO accession:
Sample GSM6810
Query DataSets for GSM6810
Status
Public on Aug 09, 2003
Title
low dose 6h, replicate 1
Sample type
RNA
Source name
WS1 human skin fibroblasts
Organism
Homo sapiens
Extracted molecule
total RNA
Description
ATCC number CRL-1502
Submission date
Jun 10, 2003
Last update date
Mar 16, 2009
Contact name
Massimiliano Gentile
E-mail(s)
massimiliano.gentile@helsinki.fi
Phone
+358-9-47448726
Fax
+358-9-1912 5554
URL
http://www.bioinfo.helsinki.fi
Organization name
Biomedicum Helsinki
Department
Biomedicum Bioinformatics Unit
Lab
Biomedicum Bioinformatics Unit
Street address
Haartmaninkatu 8
City
Helsinki
State/province
Finland
ZIP/Postal code
000 14
Country
Finland
Platform ID
GPL8300
Series (2)
GSE449
WS1 response to low dose of UV-C
GSE713
UV radiation-induced DNA damage
Data table header descriptions
ID_REF
Stat Pairs
number of probe pairs on the probe array for a specific gene target
Stat Pairs Used
number of probe pairs used in calculating VALUE
VALUE
calculated using statistical algorithm in Affy MAS 5 software
ABS_CALL
detection call based on MAS 5
Detection p-value
p-value of detection call based on MAS 5
Data table
ID_REF
Stat Pairs
Stat Pairs Used
VALUE
ABS_CALL
Detection p-value
AFFX-MurIL2_at
20
20
15.9
A
0.603089
AFFX-MurIL10_at
20
20
4.6
A
0.804734
AFFX-MurIL4_at
20
20
17.2
A
0.216524
AFFX-MurFAS_at
20
20
20.6
A
0.072700
AFFX-BioB-5_at
20
20
344.6
P
0.000754
AFFX-BioB-M_at
20
20
529.2
P
0.000060
AFFX-BioB-3_at
20
20
336.0
P
0.000044
AFFX-BioC-5_at
20
20
1089.5
P
0.000070
AFFX-BioC-3_at
20
20
893.3
P
0.000044
AFFX-BioDn-5_at
20
20
873.8
P
0.000044
AFFX-BioDn-3_at
20
20
5426.5
P
0.000081
AFFX-CreX-5_at
20
20
8451.6
P
0.000044
AFFX-CreX-3_at
20
20
13216.9
P
0.000044
AFFX-BioB-5_st
20
20
46.0
A
0.216524
AFFX-BioB-M_st
20
20
49.8
A
0.327079
AFFX-BioB-3_st
20
20
15.1
A
0.645547
AFFX-BioC-5_st
20
20
7.7
A
0.860518
AFFX-BioC-3_st
20
20
2.9
A
0.603080
AFFX-BioDn-5_st
20
20
87.5
A
0.147939
AFFX-BioDn-3_st
20
20
96.6
A
0.078002
Total number of rows:
12625
Table truncated, full table size
385 Kbytes
.
Supplementary data files not provided
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