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Sample GSM68918 Query DataSets for GSM68918
Status Public on Aug 18, 2005
Title Ames 10 month Dwarf Liver JDF56
Sample type RNA
Source name liver
Organism Mus musculus
Characteristics Prop-1 mutant (Ames) resulting in long lived dwarf pheontype
Extracted molecule total RNA
Extraction protocol Approximately 10 mg of snap frozen liver was used to extract >25 ug of total RNA using Ambion's RNAqueous-4PCR RNA extraction kit.
Label biotin
Label protocol Approximately 20 µg of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Wild type third instar larvae imaginal wing discs
Data processing Affymetrix Microarray Suite version 5.0
Submission date Aug 09, 2005
Last update date Aug 17, 2005
Contact name James H DeFord
Phone 409-747-6817
Fax 409-772-9216
Organization name University of Texas at Galveston
Department Human Biological Chemistry and Genetics
Lab Dr. Papaconstantinou
Street address 301 University Blvd.
City Galveston
State/province TX
ZIP/Postal code 77555-0643
Country USA
Platform ID GPL1261
Series (1)
GSE3150 Aging Liver Profiles of the Long Lived Prop-1 Mutant Mouse (Ames) and Wild Type Controls

Data table header descriptions
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
1415670_at 1245.7 P 0.00293
1415671_at 3132.4 P 0.000732
1415672_at 5005.3 P 0.000732
1415673_at 343.6 P 0.037598
1415674_a_at 934.1 P 0.005859
1415675_at 927.9 P 0.01416
1415676_a_at 4433.5 P 0.000244
1415677_at 1301.5 P 0.001221
1415678_at 3932.7 P 0.000244
1415679_at 3943.9 P 0.000244
1415680_at 772.6 P 0.005859
1415681_at 1486.8 P 0.000244
1415682_at 796.2 P 0.000244
1415683_at 2063.9 P 0.000244
1415684_at 1746.3 P 0.000244
1415685_at 1748.4 P 0.000244
1415686_at 1793.6 P 0.001221
1415687_a_at 7167 P 0.000244
1415688_at 3851.1 P 0.000244
1415689_s_at 919.2 P 0.001221

Total number of rows: 45037

Table truncated, full table size 1221 Kbytes.

Supplementary data files not provided

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