NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM68930 Query DataSets for GSM68930
Status Public on Aug 18, 2005
Title Ames 4 month Dwarf Liver Df179
Sample type RNA
 
Source name liver
Organism Mus musculus
Characteristics Prop-1 mutant (Ames) resulting in long lived dwarf pheontype
Extracted molecule total RNA
Extraction protocol Approximately 10 mg of snap frozen liver was used to extract >25 ug of total RNA using Ambion's RNAqueous-4PCR RNA extraction kit.
Label biotin
Label protocol Approximately 20 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Wild type third instar larvae imaginal wing discs
Data processing Affymetrix Microarray Suite version 5.0
 
Submission date Aug 09, 2005
Last update date Aug 17, 2005
Contact name James H DeFord
E-mail(s) jhdeford@utmb.edu
Phone 409-747-6817
Fax 409-772-9216
Organization name University of Texas at Galveston
Department Human Biological Chemistry and Genetics
Lab Dr. Papaconstantinou
Street address 301 University Blvd.
City Galveston
State/province TX
ZIP/Postal code 77555-0643
Country USA
 
Platform ID GPL1261
Series (1)
GSE3150 Aging Liver Profiles of the Long Lived Prop-1 Mutant Mouse (Ames) and Wild Type Controls

Data table header descriptions
ID_REF
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
1415670_at 1292.3 P 0.000244
1415671_at 2727.9 P 0.000244
1415672_at 4497.9 P 0.000732
1415673_at 503.9 P 0.005859
1415674_a_at 1123.9 P 0.000732
1415675_at 1045 P 0.00415
1415676_a_at 5023.9 P 0.000244
1415677_at 1345.3 P 0.000732
1415678_at 3082.6 P 0.000244
1415679_at 5182.8 P 0.000244
1415680_at 761 P 0.005859
1415681_at 1568.8 P 0.000244
1415682_at 868.5 P 0.000244
1415683_at 2370.2 P 0.000244
1415684_at 1476.1 P 0.000244
1415685_at 1791.3 P 0.000244
1415686_at 2118.9 P 0.001953
1415687_a_at 8755.9 P 0.000244
1415688_at 2614.7 P 0.000244
1415689_s_at 891.7 P 0.001221

Total number of rows: 45037

Table truncated, full table size 1219 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap