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Sample GSM69839 Query DataSets for GSM69839
Status Public on Aug 15, 2006
Title MO_CTC_SON_NCBI
Sample type RNA
 
Source name Supraoptic nucleus_control
Organism Rattus norvegicus
Characteristics Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Supraoptic nucleus
Extracted molecule total RNA
Label Enzo BioArray High Yield RNA Transcript Labelling Kit (Affymetrix, Santa Clara, CA, USA and Enzo Diagnostics).
Label protocol In vitro transcription of template was carried out in the presence of biotinylated UTP and CTP using the Enzo BioArray High Yield RNA Transcript Labelling Kit (Affymetrix, Santa Clara, CA, USA and Enzo Diagnostics).
 
Hybridization protocol Standard Affymetrix procedures
Scan protocol Standard Affymetrix procedures
Description SON - Control
Data processing Microarray Suite version 5.0
 
Submission date Aug 15, 2005
Last update date Aug 15, 2005
Contact name DAVID MURPHY
Organization name University of Bristol
Department Medicine and Dentistry
Lab Laboratories for Integrative Neuroscience and Endocrinolgy
Street address Whitson Street
City Bristol
State/province AVON
ZIP/Postal code BS1 3NY
Country United Kingdom
 
Platform ID GPL85
Series (1)
GSE3131 Microarray analysis of the dynamics of gene expression plasticity in the supraoptic nucleus following dehydration

Data table header descriptions
ID_REF
VALUE Signal intensity
ABS_CALL Indication of the transcript being present (P), absent (A), marginal (M)
DETECTION P-VALUE p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 1.7 A 0.891021
AFFX-MurIL10_at 6.8 A 0.544587
AFFX-MurIL4_at 0.3 A 0.916408
AFFX-MurFAS_at 2.1 A 0.595398
AFFX-BioB-5_at 72.1 P 0.00844
AFFX-BioB-M_at 98.6 P 0.000446
AFFX-BioB-3_at 91.3 P 0.000446
AFFX-BioC-5_at 199.6 P 0.000169
AFFX-BioC-3_at 144.4 P 0.00007
AFFX-BioDn-5_at 138.6 P 0.001102
AFFX-BioDn-3_at 770.6 P 0.000138
AFFX-CreX-5_at 1041.1 P 0.000044
AFFX-CreX-3_at 1149.5 P 0.000044
AFFX-BioB-5_st 12.2 A 0.216524
AFFX-BioB-M_st 11.5 A 0.559354
AFFX-BioB-3_st 3.1 A 0.904333
AFFX-BioC-5_st 3.6 A 0.852061
AFFX-BioC-3_st 5.9 A 0.712257
AFFX-BioDn-5_st 17.2 A 0.39692
AFFX-BioDn-3_st 23.6 A 0.195266

Total number of rows: 8799

Table truncated, full table size 248 Kbytes.




Supplementary data files not provided

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