NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM69840 Query DataSets for GSM69840
Status Public on Aug 15, 2006
Title MO_DH1a_SON_NCBI
Sample type RNA
 
Source name Supraoptic nucleus_1d Dehydrated
Organism Rattus norvegicus
Characteristics Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Supraoptic nucleus
Extracted molecule total RNA
Label Enzo BioArray High Yield RNA Transcript Labelling Kit (Affymetrix, Santa Clara, CA, USA and Enzo Diagnostics).
Label protocol In vitro transcription of template was carried out in the presence of biotinylated UTP and CTP using the Enzo BioArray High Yield RNA Transcript Labelling Kit (Affymetrix, Santa Clara, CA, USA and Enzo Diagnostics).
 
Hybridization protocol Standard Affymetrix procedures
Scan protocol Standard Affymetrix procedures
Description SON - 1d Dehydrated
Data processing Microarray Suite version 5.0
 
Submission date Aug 15, 2005
Last update date Aug 15, 2005
Contact name DAVID MURPHY
Organization name University of Bristol
Department Medicine and Dentistry
Lab Laboratories for Integrative Neuroscience and Endocrinolgy
Street address Whitson Street
City Bristol
State/province AVON
ZIP/Postal code BS1 3NY
Country United Kingdom
 
Platform ID GPL85
Series (1)
GSE3131 Microarray analysis of the dynamics of gene expression plasticity in the supraoptic nucleus following dehydration

Data table header descriptions
ID_REF
VALUE Signal intensity
ABS_CALL Indication of the transcript being present (P), absent (A), marginal (M)
DETECTION P-VALUE p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 6.4 A 0.724854
AFFX-MurIL10_at 3.6 A 0.686277
AFFX-MurIL4_at 1 A 0.932322
AFFX-MurFAS_at 2.8 A 0.834139
AFFX-BioB-5_at 123 P 0.002867
AFFX-BioB-M_at 190 P 0.000446
AFFX-BioB-3_at 172.1 P 0.00039
AFFX-BioC-5_at 389.3 P 0.000169
AFFX-BioC-3_at 208.6 P 0.000052
AFFX-BioDn-5_at 183 P 0.002556
AFFX-BioDn-3_at 987.3 P 0.000484
AFFX-CreX-5_at 1316.7 P 0.000044
AFFX-CreX-3_at 1490.6 P 0.000052
AFFX-BioB-5_st 5.8 A 0.645547
AFFX-BioB-M_st 4.8 A 0.834139
AFFX-BioB-3_st 4.8 A 0.921998
AFFX-BioC-5_st 5.2 A 0.941556
AFFX-BioC-3_st 2.8 A 0.891021
AFFX-BioDn-5_st 2 A 0.58862
AFFX-BioDn-3_st 29.3 A 0.340661

Total number of rows: 8799

Table truncated, full table size 249 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap