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Sample GSM69842 Query DataSets for GSM69842
Status Public on Aug 15, 2006
Title MO_DH1c_SON_NCBI
Sample type RNA
 
Source name Supraoptic nucleus_1d Dehydrated
Organism Rattus norvegicus
Characteristics Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Supraoptic nucleus
Extracted molecule total RNA
Label Enzo BioArray High Yield RNA Transcript Labelling Kit (Affymetrix, Santa Clara, CA, USA and Enzo Diagnostics).
Label protocol In vitro transcription of template was carried out in the presence of biotinylated UTP and CTP using the Enzo BioArray High Yield RNA Transcript Labelling Kit (Affymetrix, Santa Clara, CA, USA and Enzo Diagnostics).
 
Hybridization protocol Standard Affymetrix procedures
Scan protocol Standard Affymetrix procedures
Description SON - 1d Dehydrated
Data processing Microarray Suite version 5.0
 
Submission date Aug 15, 2005
Last update date Aug 15, 2005
Contact name DAVID MURPHY
Organization name University of Bristol
Department Medicine and Dentistry
Lab Laboratories for Integrative Neuroscience and Endocrinolgy
Street address Whitson Street
City Bristol
State/province AVON
ZIP/Postal code BS1 3NY
Country United Kingdom
 
Platform ID GPL85
Series (1)
GSE3131 Microarray analysis of the dynamics of gene expression plasticity in the supraoptic nucleus following dehydration

Data table header descriptions
ID_REF
VALUE Signal intensity
ABS_CALL Indication of the transcript being present (P), absent (A), marginal (M)
DETECTION P-VALUE p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 3.3 A 0.824672
AFFX-MurIL10_at 4.2 A 0.470241
AFFX-MurIL4_at 1.6 A 0.772364
AFFX-MurFAS_at 1 A 0.81201
AFFX-BioB-5_at 66.3 P 0.00844
AFFX-BioB-M_at 118.4 P 0.000662
AFFX-BioB-3_at 94.1 P 0.000754
AFFX-BioC-5_at 211.9 P 0.000225
AFFX-BioC-3_at 138.5 P 0.000052
AFFX-BioDn-5_at 149 P 0.000972
AFFX-BioDn-3_at 794 P 0.000117
AFFX-CreX-5_at 968.4 P 0.000044
AFFX-CreX-3_at 1327.5 P 0.000052
AFFX-BioB-5_st 18.1 A 0.108979
AFFX-BioB-M_st 17.3 A 0.48511
AFFX-BioB-3_st 5.2 A 0.9273
AFFX-BioC-5_st 3.4 A 0.937071
AFFX-BioC-3_st 3.3 A 0.794268
AFFX-BioDn-5_st 6.7 A 0.382599
AFFX-BioDn-3_st 26.6 A 0.108979

Total number of rows: 8799

Table truncated, full table size 248 Kbytes.




Supplementary data files not provided

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