NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM71502 Query DataSets for GSM71502
Status Public on Dec 01, 2005
Title MCF7_Hypoxia_2
Sample type RNA
 
Source name MCF7, Hypoxia 1% Oxygen, 16 hours
Organism Homo sapiens
Characteristics human breast carcinoma MCF7 cells
Treatment protocol Hypoxia 1% Oxygen, 16 hours in an Invivo2 Hypoxia Workstation
Growth protocol Media: DMEM, 2mM L-Glutamine and 10% Fetal Bovine Serum
Extracted molecule total RNA
Extraction protocol Absolutely RNA RT-PCR Miniprep Kit(Stratagene)
Label Biotin-Labeled cRNA
Label protocol Refer to the Affymetrix Expression Analysis Technical Manual
 
Hybridization protocol Refer to the Affymetrix Expression Analysis Technical Manual
Scan protocol Refer to the Affymetrix Expression Analysis Technical Manual
Description MCF7 cells grown in Hypoxia
Data processing Normalized using the GCRMA algorithm
 
Submission date Aug 23, 2005
Last update date Aug 24, 2005
Contact name Ioannis Ragoussis
E-mail(s) ioannis.ragoussis@well.ox.ac.uk
URL http://www.well.ox.ac.uk/genomics/index.shtml
Organization name University of Oxford
Department The Wellcome Trust Centre for Human Genetics
Lab Genomics
Street address Roosevelt Drive
City Oxford
ZIP/Postal code OX3 7BN
Country United Kingdom
 
Platform ID GPL96
Series (1)
GSE3188 Hypoxic regulation of gene expression is dominated by the HIF system and can be mimicked by DMOG

Data table header descriptions
ID_REF
VALUE Signal, normalized using the GCRMA algorithm

Data table
ID_REF VALUE
1007_s_at 3216.5698
1053_at 313.1843
117_at 82.820335
121_at 199.05193
1255_g_at 4.5133376
1294_at 12.123952
1316_at 36.27806
1320_at 7.7677913
1405_i_at 17.319906
1431_at 8.055128
1438_at 48.548733
1487_at 187.17976
1494_f_at 10.065018
1598_g_at 153.47818
160020_at 38.199623
1729_at 209.98445
1773_at 14.267463
177_at 9.062493
179_at 283.31943
1861_at 19.401485

Total number of rows: 22283

Table truncated, full table size 447 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap