|
| Status |
Public on Nov 29, 2011 |
| Title |
TKO_num1_rep3 |
| Sample type |
RNA |
| |
|
| Source name |
cell line
|
| Organism |
Homo sapiens |
| Characteristics |
cell line: TKO1
tissue: blood
gender: Female
age: 67
|
| Treatment protocol |
No treatment
|
| Growth protocol |
RPMI1640 supplied with 10% fetal bovine serum
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNeasy Plus Mini Kit (QIAGEN)
|
| Label |
biotin
|
| Label protocol |
Illumina TotalPrep RNA Amplification Kit (Ambion)
|
| |
|
| Hybridization protocol |
Illumina protocol
|
| Scan protocol |
Illumina protocol
|
| Description |
TKO1.3rd
Stanford SFGF
|
| Data processing |
Quantile normalization was applied to control for the technical variations between arrays.
|
| |
|
| Submission date |
May 09, 2011 |
| Last update date |
Nov 29, 2011 |
| Contact name |
kaifu chen |
| E-mail(s) |
kaifuc@bcm.edu
|
| Organization name |
Baylor College of Medicine
|
| Street address |
1 Baylor plaza, suite 450A
|
| City |
Houston |
| ZIP/Postal code |
77030 |
| Country |
USA |
| |
|
| Platform ID |
GPL6947 |
| Series (2) |
| GSE29148 |
NSD2 links dimethylation of histone H3 at lysine 36 to oncogenic programming [TKO] |
| GSE29305 |
NSD2 links dimethylation of histone H3 at lysine 36 to oncogenic programming |
|
