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Sample GSM729902 Query DataSets for GSM729902
Status Public on Dec 31, 2011
Title MF1_2_RA
Sample type RNA
 
Source name right atrium
Organism Mus musculus
Characteristics strain: MF1
age: 12 months
tissue: Right atrium
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN RNeasy micro fibrous tissue kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplification Kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing The data were normalised using quantile normalisation with Genespring GX 11.5.1
 
Submission date May 24, 2011
Last update date Dec 31, 2011
Contact name Peter Christian Kahr
Organization name University Hospital Münster
Street address Grevener Straße 1
City Münster
ZIP/Postal code 48149
Country Germany
 
Platform ID GPL6885
Series (1)
GSE29500 Genome-wide analysis of atrial left-right differences in two different mouse strains

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1250052 0.07507706 0.98997
ILMN_3122480 -0.008087158 0.36341
ILMN_2599935 0.22459555 100
ILMN_2675543 0.024006367 0.83459
ILMN_2686883 0.08457136 0.79323
ILMN_2751818 0.008384228 0.44862
ILMN_2728634 -0.10971451 0.51128
ILMN_3040515 0.06405687 0.82456
ILMN_2711608 0.06170702 0.74687
ILMN_1232875 0.076010704 0.66291
ILMN_1258507 -0.06761694 0.10902
ILMN_2746142 0.013552189 0.43985
ILMN_1252690 0.08333826 0.93985
ILMN_2655499 -3.54E-04 0.3609
ILMN_1252870 -0.038781166 0.59399
ILMN_1248179 -0.017456055 0.25564
ILMN_2649955 0.011704445 0.99749
ILMN_2628708 -0.16304874 0.1817
ILMN_3024781 0.010087013 0.44987
ILMN_2705628 0.77409935 100

Total number of rows: 25697

Table truncated, full table size 788 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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