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Sample GSM73015 Query DataSets for GSM73015
Status Public on Sep 12, 2005
Title Brain_Adult_Salineip_4hr_mouse2 (YP2_#59)
Sample type RNA
Source name Mouse brain, Adult, 4hr post saline ip injection
Organism Mus musculus
Characteristics Strain: In-house BALB/c mice; Gender: Male; Age: 4 months old; Tissue: Brain; Treatment: 4 hours post saline ip.
Extracted molecule total RNA
Label Biotin-labeled
Description The adult mouse was injected intraperitoneal (ip) with saline (~100ul/mouse) and was killed 4 hours after injection by CO2 asphyxiation. Brain was removed, separated in half at the longitudinal fissure, frozen in liquid nitrogen and stored at -80C until use.
Data processing Scaling was used: All probe sets, target signal 150. Data parameters: Alpha1 (0.05), Alpha2 (0.065), Tau (0.015), Gamma1L (0.002), Gamma1H (0.002), Gamma2L (0.002667), Gamma2H (0.002667), Perturbation (1.1). Algorithm: Statistical, GCOS 1.1.
Submission date Sep 01, 2005
Last update date Sep 07, 2005
Contact name Rodney W. Johnson
Phone 217-333-2118
Fax 217-333-8286
Organization name Univ of Illinois in Urbana
Department Animal Sciences
Lab Dr. Rodney Johnson's lab
Street address 1207 W. Gregory Dr.
City Urbana
State/province IL
ZIP/Postal code 61801
Country USA
Platform ID GPL1261
Series (1)
GSE3253 Exaggerated neuroinflammation and sickness behavior in aged mice after activation of the peripheral innate immune system

Data table header descriptions
VALUE Scaled signal count data
ABS_CALL The transcript is detected (Present), not detected (Absent) and marginally detected (Marginal)

Data table
AFFX-BioB-5_at 413.4 P
AFFX-BioB-M_at 794.1 P
AFFX-BioB-3_at 416.4 P
AFFX-BioC-5_at 814.2 P
AFFX-BioC-3_at 881.4 P
AFFX-BioDn-5_at 1151.2 P
AFFX-BioDn-3_at 4322.7 P
AFFX-CreX-5_at 9233.2 P
AFFX-CreX-3_at 12930.1 P
AFFX-DapX-5_at 13.9 A
AFFX-DapX-M_at 11.7 A
AFFX-DapX-3_at 2.7 A
AFFX-LysX-5_at 14.7 A
AFFX-LysX-M_at 1.9 A
AFFX-LysX-3_at 11.9 A
AFFX-PheX-5_at 2.9 A
AFFX-PheX-M_at 3 A
AFFX-PheX-3_at 7 A
AFFX-ThrX-5_at 1.6 A
AFFX-ThrX-M_at 3 A

Total number of rows: 45101

Table truncated, full table size 809 Kbytes.

Supplementary data files not provided

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