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Sample GSM73341 Query DataSets for GSM73341
Status Public on Sep 12, 2005
Title Brain_Aged_LPSip_4hr_mouse3 (OL3_#69)
Sample type RNA
Source name Mouse brain, Aged, 4hr post LPS ip injection
Organism Mus musculus
Characteristics Strain: In-house BALB/c mice; Gender: Male; Age: 22 months old; Tissue: Brain; Treatment: 4 hours post LPS 0.33mg/kg BW ip.
Extracted molecule total RNA
Label Biotin-labeled
Description The aged mouse was injected intraperitoneal (ip) with Escherichia coli lipopolysaccharide (LPS, 0.33mg/kg body weight (BW), ~10ug/mouse; serotype O127:B8, Sigma) and was killed 4 hours after injection by CO2 asphyxiation. Brain was removed, separated in half at the longitudinal fissure, frozen in liquid nitrogen and stored at -80C until use.
Data processing Scaling was used: All probe sets, target signal 150. Data parameters: Alpha1 (0.05), Alpha2 (0.065), Tau (0.015), Gamma1L (0.002), Gamma1H (0.002), Gamma2L (0.002667), Gamma2H (0.002667), Perturbation (1.1). Algorithm: Statistical, GCOS 1.1.
Submission date Sep 06, 2005
Last update date Sep 07, 2005
Contact name Rodney W. Johnson
Phone 217-333-2118
Fax 217-333-8286
Organization name Univ of Illinois in Urbana
Department Animal Sciences
Lab Dr. Rodney Johnson's lab
Street address 1207 W. Gregory Dr.
City Urbana
State/province IL
ZIP/Postal code 61801
Country USA
Platform ID GPL1261
Series (1)
GSE3253 Exaggerated neuroinflammation and sickness behavior in aged mice after activation of the peripheral innate immune system

Data table header descriptions
VALUE Scaled signal count data
ABS_CALL The transcript is detected (Present), not detected (Absent) and marginally detected (Marginal)

Data table
AFFX-BioB-5_at 84.2 P
AFFX-BioB-M_at 94.6 P
AFFX-BioB-3_at 75.3 P
AFFX-BioC-5_at 349 P
AFFX-BioC-3_at 310.5 P
AFFX-BioDn-5_at 883.7 P
AFFX-BioDn-3_at 1586.8 P
AFFX-CreX-5_at 5191.4 P
AFFX-CreX-3_at 6837.7 P
AFFX-DapX-5_at 3.7 A
AFFX-DapX-M_at 2.6 A
AFFX-DapX-3_at 3.3 A
AFFX-LysX-5_at 16.1 A
AFFX-LysX-M_at 6.4 A
AFFX-LysX-3_at 4.8 A
AFFX-PheX-5_at 2.5 A
AFFX-PheX-M_at 2.6 A
AFFX-PheX-3_at 27.6 A
AFFX-ThrX-5_at 6.4 A
AFFX-ThrX-M_at 12.5 A

Total number of rows: 45101

Table truncated, full table size 809 Kbytes.

Supplementary data files not provided

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