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GEO accession:
Sample GSM73381
Query DataSets for GSM73381
Status
Public on Dec 01, 2005
Title
AML_t(15;17)_LIB1
Sample type
SAGE
Anchor
NlaIII
Tag Count
72483
Tag Length
10
Source name
bone marrow, CD15+ myeloid progenitor cells
Organism
Homo sapiens
Characteristics
Acute Myeoloid Leukemia (AML) patient sample with chromosomal translocation t(15;17)
Extracted molecule
total RNA
Description
SAGE analysis of gene expression in leukemic myeloid progenitor cells isolated from bone marrow
Submission date
Sep 06, 2005
Last update date
Nov 19, 2008
Contact name
San Ming Wang
E-mail(s)
swang1@northwestern.edu
Phone
224-364-7491
Fax
224-364-5003
Organization name
ENH Research Institute, Northwestern University
Department
Center for Functional Genomics
Street address
1001 University Place
City
Evanston
State/province
IL
ZIP/Postal code
60062
Country
USA
Platform ID
GPL4
Series (1)
GSE3255
Gene Expression Profiles with Common Translocations in Acute Myeloid Leukemia (AML) using SAGE
Data table header descriptions
TAG
Ten-base SAGE tag
COUNT
Absolute tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
TCTAAAGCGG
5948
82060.62
CTAAAGCGGC
4984
68760.95
AAAGCGGCCG
3563
49156.35
AAGCGGCCGC
2441
33676.86
CCACTGCACT
1092
15065.60
GTGAAACCCC
911
12568.46
CCTGTAATCC
796
10981.89
TCTAAGCGGC
669
9229.75
CTAAGCGGCC
621
8567.53
TAAAGCGGCC
452
6235.94
GTGAAACCCT
433
5973.81
TCCAAAGCGG
397
5477.15
CCATTGCACT
276
3807.79
TCTTAAGCGG
213
2938.62
AGGTCAGGAG
212
2924.82
CTTAAGCGGC
202
2786.86
CCTGTAGTCC
199
2745.47
AAGACAGTGG
185
2552.32
ACGCAGGGAG
171
2359.17
AACCCGGGAG
163
2248.80
Total number of rows:
27117
Table truncated, full table size
504 Kbytes
.
Supplementary data files not provided
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