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GEO accession:
Sample GSM73383
Query DataSets for GSM73383
Status
Public on Dec 01, 2005
Title
AML_t(15;17)_LIB3
Sample type
SAGE
Anchor
NlaIII
Tag Count
48394
Tag Length
10
Source name
bone marrow, CD15+ myeloid progenitor cells
Organism
Homo sapiens
Characteristics
Acute Myeoloid Leukemia (AML) patient sample with chromosomal translocation t(15;17)
Extracted molecule
total RNA
Description
SAGE analysis of gene expression in leukemic myeloid progenitor cells isolated from bone marrow
Submission date
Sep 06, 2005
Last update date
Nov 19, 2008
Contact name
San Ming Wang
E-mail(s)
swang1@northwestern.edu
Phone
224-364-7491
Fax
224-364-5003
Organization name
ENH Research Institute, Northwestern University
Department
Center for Functional Genomics
Street address
1001 University Place
City
Evanston
State/province
IL
ZIP/Postal code
60062
Country
USA
Platform ID
GPL4
Series (1)
GSE3255
Gene Expression Profiles with Common Translocations in Acute Myeloid Leukemia (AML) using SAGE
Data table header descriptions
TAG
Ten-base SAGE tag
COUNT
Absolute tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
AAGCGGCCGC
3357
69368.10
AAAGCGGCCG
2767
57176.51
CCACTGCACT
981
20271.11
GTGAAACCCC
885
18287.39
TCTAAAGCGG
639
13204.12
CCTGTAATCC
610
12604.87
TCCAAAGCGG
570
11778.32
CTAAAGCGGC
471
9732.61
GTGAAACCCT
422
8720.09
CCCATCGTCC
339
7005.00
CCATTGCACT
250
5165.93
CACCTAATTG
220
4546.02
CTAAGACTTC
203
4194.73
AGGTCAGGAG
170
3512.83
AAAACATTCT
149
3078.89
ACTTTTTCAA
148
3058.23
GCAAAACCCC
134
2768.94
CCTGTAGTCC
133
2748.27
TAAAGCGGCC
129
2665.62
GGGAAGCAGA
125
2582.96
Total number of rows:
22137
Table truncated, full table size
411 Kbytes
.
Supplementary data files not provided
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