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GEO accession:
Sample GSM73385
Query DataSets for GSM73385
Status
Public on Dec 01, 2005
Title
AML_t(15;17)_LIB5
Sample type
SAGE
Anchor
NlaIII
Tag Count
57563
Tag Length
10
Source name
bone marrow, CD15+ myeloid progenitor cells
Organism
Homo sapiens
Characteristics
Acute Myeoloid Leukemia (AML) patient sample with chromosomal translocation t(15;17)
Extracted molecule
total RNA
Description
SAGE analysis of gene expression in leukemic myeloid progenitor cells isolated from bone marrow
Submission date
Sep 06, 2005
Last update date
Nov 19, 2008
Contact name
San Ming Wang
E-mail(s)
swang1@northwestern.edu
Phone
224-364-7491
Fax
224-364-5003
Organization name
ENH Research Institute, Northwestern University
Department
Center for Functional Genomics
Street address
1001 University Place
City
Evanston
State/province
IL
ZIP/Postal code
60062
Country
USA
Platform ID
GPL4
Series (1)
GSE3255
Gene Expression Profiles with Common Translocations in Acute Myeloid Leukemia (AML) using SAGE
Data table header descriptions
TAG
Ten-base SAGE tag
COUNT
Absolute tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
CCACTGCACT
1405
24408.04
GTGAAACCCC
1127
19578.55
CCTGTAATCC
1072
18623.07
GCTCCCCTTT
631
10961.90
GTGAAACCCT
506
8790.37
AAGACAGTGG
456
7921.76
CCATTGCACT
424
7365.84
GGCCACGTAG
370
6427.74
TTGGTCCTCT
349
6062.92
GGATTTGGCC
321
5576.50
AAGCGGCCGC
308
5350.66
CCTGTAGTCC
273
4742.63
GAGGGAGTTT
256
4447.30
TAGGTTGTCT
252
4377.81
AGGTCAGGAG
232
4030.37
AACCCGGGAG
230
3995.62
TGCACGTTTT
222
3856.64
AGGGCTTCCA
220
3821.90
CACAAACGGT
216
3752.41
GCAAGAAAGT
214
3717.67
Total number of rows:
17895
Table truncated, full table size
334 Kbytes
.
Supplementary data files not provided
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