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Sample GSM74049 Query DataSets for GSM74049
Status Public on Sep 13, 2005
Title Aorta 19 days post coitum chip B
Sample type RNA
 
Source name Aorta
Organism Rattus norvegicus
Characteristics Aorta
Extracted molecule total RNA
Label Standard Affymetrix protocol (Affymetrix GeneChip Expression Analysis Technical Manual, rev.3. 2001)
 
Description Isolation of rat Ao. Rats were mated for 24 hours and the end of this period was marked as day zero of pregnancy. Near-term fetuses (gestational age, 19 days) were delivered by Cesarean section from a normoxic dam. All animals were killed by cervical dislocation and, to isolate the DA and Ao (arch and thoracic sections), were secured inside a chamber filled with ice-cold Krebs medium through which was bubbled a gas mixture with 2.5 (fetus) or 12.5% (newborn) oxygen. Special care was taken to obtain the blood vessels free of any adhering tissue.
Data processing Original Affymetrix output files
 
Submission date Sep 11, 2005
Last update date Sep 12, 2005
Contact name Flavio Coceani
E-mail(s) coceani@sssup.it
Phone +39 050 883327
Fax +39 050 883215
Organization name Scuola Superiore S. Anna
Department Settore di Scienze Mediche
Street address Piazza Martiri della Libertà, 33
City Pisa
ZIP/Postal code 56127
Country Italy
 
Platform ID GPL86
Series (1)
GSE3290 Expression profiling in perinatal Ductus Arteriosus (DA) and Aorta (Ao).

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL Detection
DETECTION P-VALUE Detection p value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 26.2 A 0.814869
AFFX-MurIL10_at 23.5 A 0.699394
AFFX-MurIL4_at 42.5 A 0.631562
AFFX-MurFAS_at 22.3 A 0.631562
AFFX-BioB-5_at 414.3 A 0.147939
AFFX-BioB-M_at 634.8 P 0.003212
AFFX-BioB-3_at 345.6 P 0.018281
AFFX-BioC-5_at 1746 P 0.000169
AFFX-BioC-3_at 925.3 P 0.001593
AFFX-BioDn-5_at 1530 P 0.000258
AFFX-BioDn-3_at 11433.9 P 0.000258
AFFX-CreX-5_at 15500.5 P 0.000044
AFFX-CreX-3_at 21510.1 P 0.000044
AFFX-BioB-5_st 163.7 A 0.313723
AFFX-BioB-M_st 118 A 0.5
AFFX-BioB-3_st 47.6 A 0.814869
AFFX-BioC-5_st 40.1 A 0.891021
AFFX-BioC-3_st 28.7 A 0.712257
AFFX-BioDn-5_st 80.9 A 0.455413
AFFX-BioDn-3_st 239.4 A 0.175328

Total number of rows: 8791

Table truncated, full table size 272 Kbytes.




Supplementary data files not provided

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