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GEO accession:
Sample GSM74416
Query DataSets for GSM74416
Status
Public on Oct 14, 2005
Title
HSP-Spg4-1aUA-s2
Sample type
RNA
Source name
Human skeletal muscle
Organism
Homo sapiens
Characteristics
HSP
Extracted molecule
total RNA
Label
biotin
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
Hereditary spastic paraplegia (SPG4); RNA extracted from muscle biopsy, which was flash-frozen in isopentane cooled in liquid nitrogen immediately after excision
Data processing
Affymetrix MAS5.0
Submission date
Sep 14, 2005
Last update date
Oct 01, 2019
Contact name
Eric P Hoffman
E-mail(s)
ericphoffman@gmail.com
Organization name
Binghamton University - SUNY
Department
Pharmaceutical Sciences
Street address
PO Box 6000
City
Binghamton
State/province
NY
ZIP/Postal code
13902
Country
USA
Platform ID
GPL96
Series (2)
GSE1300
Hereditary Spastic Paraparesis
GSE3307
Comparative profiling in 13 muscle disease groups
Data table header descriptions
ID_REF
VALUE
SIGNAL MAS5.0
ABS_CALL
Presence or Absence of gene transcript in sample
Data table
ID_REF
VALUE
ABS_CALL
1007_s_at
2387.598876953125
P
1053_at
298.8367004394531
A
117_at
393.3784484863281
A
121_at
2792.963623046875
P
1255_g_at
160.05807495117188
A
1294_at
737.18115234375
A
1316_at
647.1814575195312
P
1320_at
58.36507034301758
A
1405_i_at
107.64360046386719
A
1431_at
106.35198974609375
A
1438_at
65.78682708740234
A
1487_at
4238.3056640625
P
1494_f_at
887.3055419921875
A
1598_g_at
7831.02490234375
P
160020_at
1310.71044921875
P
1729_at
122.89627075195312
A
1773_at
604.046875
A
177_at
114.14082336425781
A
179_at
3923.892333984375
P
1861_at
476.6983947753906
A
Total number of rows:
22283
Table truncated, full table size
670 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM74416.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
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