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Sample GSM754519 Query DataSets for GSM754519
Status Public on Jul 07, 2011
Title blood 0.5g T7 ppB
Sample type RNA
 
Source name blood 0.5g T7 ppB
Organism Homo sapiens
Characteristics donor: B
Sex: M
tissue: blood
treatment: 0.5g APAP exposure
time: 7h
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the PAXgene Blood RNA kit (PreAnalytiX/Qiagen) according to the manufacturers protocol (including Dnase) and was globin reduced using the GLOBINclear kit (Ambion) according to the manufacturers protocol
Label biotin
Label protocol We used standard Affymetrix labeling protocols
 
Hybridization protocol We used standard Affymetrix hybridisation rotocols
Scan protocol We used standard Affymetrix scanning parameters
Description globin reduced total RNA
sample 0.5g APAP exposure
Data processing All samples were normalized by RMA algorithm and analyzed by SAM (FC>1.5 and FDR<10%).
 
Submission date Jul 05, 2011
Last update date Jul 07, 2011
Contact name marlon jetten
E-mail(s) marlon.jetten@maastrichtuniversity.nl
Organization name maastricht university
Street address universiteitssingel 50
City Maastricht
ZIP/Postal code 6200MD
Country Netherlands
 
Platform ID GPL10526
Series (1)
GSE30418 Low dose human APAP exposure

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1_at 109.2711676
10_at 18.48112058
100_at 539.6992541
1000_at 33.59486037
10000_at 21.98356384
10001_at 267.915751
10002_at 19.15274865
10003_at 7.081266356
10004_at 136.7888285
100048912_at 12.80009191
100049716_at 84.21557038
10005_at 247.4130837
10006_at 636.122736
10007_at 317.8044534
10008_at 250.1406232
10009_at 216.0097386
100093630_at 219.3213592
1001_at 21.9624928
10010_at 311.2733984
100101467_at 73.01904216

Total number of rows: 17788

Table truncated, full table size 361 Kbytes.




Supplementary file Size Download File type/resource
GSM754519_ppB_0.5g_t7_HG-U133_Plus_2_.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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