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Sample GSM754537 Query DataSets for GSM754537
Status Public on Jul 07, 2011
Title blood 2g T1 ppB
Sample type RNA
 
Source name blood 2g T1 ppB
Organism Homo sapiens
Characteristics donor: B
Sex: M
tissue: blood
treatment: 2g APAP exposure
time: 1h
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the PAXgene Blood RNA kit (PreAnalytiX/Qiagen) according to the manufacturers protocol (including Dnase) and was globin reduced using the GLOBINclear kit (Ambion) according to the manufacturers protocol
Label biotin
Label protocol We used standard Affymetrix labeling protocols
 
Hybridization protocol We used standard Affymetrix hybridisation rotocols
Scan protocol We used standard Affymetrix scanning parameters
Description globin reduced total RNA
sample 2g APAP exposure
Data processing All samples were normalized by RMA algorithm and analyzed by SAM (FC>1.5 and FDR<10%).
 
Submission date Jul 05, 2011
Last update date Jul 07, 2011
Contact name marlon jetten
E-mail(s) marlon.jetten@maastrichtuniversity.nl
Organization name maastricht university
Street address universiteitssingel 50
City Maastricht
ZIP/Postal code 6200MD
Country Netherlands
 
Platform ID GPL10526
Series (1)
GSE30418 Low dose human APAP exposure

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1_at 57.15130603
10_at 10.26400675
100_at 380.5539224
1000_at 20.43803745
10000_at 12.62270078
10001_at 187.6433819
10002_at 10.74493924
10003_at 5.87922496
10004_at 79.82376199
100048912_at 11.92920802
100049716_at 69.66420654
10005_at 189.313697
10006_at 579.5012545
10007_at 235.2937021
10008_at 330.2413584
10009_at 142.5552539
100093630_at 192.3505206
1001_at 11.58875797
10010_at 261.6015172
100101467_at 51.5063254

Total number of rows: 17788

Table truncated, full table size 361 Kbytes.




Supplementary file Size Download File type/resource
GSM754537_ppB_t1_HG-U133_Plus_2_.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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