NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM75741 Query DataSets for GSM75741
Status Public on Sep 26, 2005
Title oocyte from secondary follicle stage MOE430B rep1
Sample type RNA
 
Source name oocyte
Organism Mus musculus
Characteristics in vivo,secondary follicle stage, oocyte
Extracted molecule total RNA
Extraction protocol 60 oocytes were collected from ovary of 12 day old SJLB6 female mouse.Total RNA was extracted and purified using an Picopure kit (Arcturus).
Label biotin
Label protocol total RNA from 60 oocytes was processed to produce biotinylated cRNA targets using Affy Small Sample Target Labeling Assay Version II.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description oocyte from secondary follicle stage in vivo
Data processing Affymetrix Microarray Suite version 5.0
 
Submission date Sep 22, 2005
Last update date Sep 22, 2005
Contact name Hua Pan
E-mail(s) huapan@sas.upenn.edu
Organization name University of Pennsylvania
Department Department of Biology
Street address 415 S University Avenue
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platform ID GPL340
Series (1)
GSE3351 Gene expression during oocyte development

Data table header descriptions
ID_REF
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)

Data table
ID_REF VALUE ABS_CALL
1419781_at 14.6 A
1419783_at 22.5 A
1419784_x_at 153.7 A
1419786_at 12.2 A
1419787_a_at 453.2 A
1419788_at 49.1 A
1419791_at 155.4 A
1419792_at 19.5 A
1419793_at 1781.8 P
1419794_at 91.4 A
1419804_at 13.4 A
1419813_at 2.3 A
1419824_a_at 893.3 P
1419825_at 42.6 A
1419828_at 19.8 A
1419829_a_at 1340.2 P
1419837_at 14.5 A
1419844_a_at 31.7 A
1419853_a_at 27.9 A
1419871_at 101.3 A

Total number of rows: 22411

Table truncated, full table size 399 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap