|
| Status |
Public on Jul 04, 2012 |
| Title |
Expression data of 217_ACa |
| Sample type |
RNA |
| |
|
| Source name |
Patient 217
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: Colorecal Cancer
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Surgically isolated colorectal cancers were immediately frozen in liquid nitrogen. Tissues were lysed and total RNA was isolated using RNeasy Mini Kit (QIAGEN, Chatswort,CA) according to the manufacturer’s instructions.
|
| Label |
biotin
|
| Label protocol |
Approximately 8 ug of total RNA was processed to produce biotinylated cRNA targets.
|
| |
|
| Hybridization protocol |
standard Affymetrix procedures
|
| Scan protocol |
standard Affymetrix procedures
|
| Description |
CIN-high
|
| Data processing |
Rubust Multichip Analysis (RMA)
|
| |
|
| Submission date |
Jul 10, 2011 |
| Last update date |
Jul 04, 2012 |
| Contact name |
Toshiaki Watanabe |
| Phone |
81-3-5800-8653
|
| Organization name |
University of Tokyo
|
| Department |
Department of Surgical Oncology
|
| Street address |
7-3-1, Hongo
|
| City |
Bunkyo-ku |
| State/province |
Tokyo |
| ZIP/Postal code |
113-8655 |
| Country |
Japan |
| |
|
| Platform ID |
GPL570 |
| Series (1) |
| GSE30540 |
A new classification of chromosome instability (CIN) phenotype, CIN-high and CIN-low |
|
