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GEO accession:
Sample GSM761254
Query DataSets for GSM761254
Status
Public on Jul 15, 2011
Title
T7, sni, biological rep3
Sample type
RNA
Source name
DRG_RNA
Organism
Rattus norvegicus
Characteristics
time after lesion (days): 7
lesion: sni
strain: Wistar
age: 8 to 12 weeks old
Treatment protocol
L4/L5 DRG were dissected from lesioned animals at the indicated time points
Growth protocol
Eight- to 12-week-old Wistar rats were subjected to crush lesion
Extracted molecule
total RNA
Extraction protocol
Qiagen Rneasy
Label
biotin
Label protocol
Affymetrix protocol
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
L4-L5 rat DRGs after sciatic SNI lesion
Data processing
Array data were preprocessed with the robust multichip analysis algorithm (RMA)
Submission date
Jul 14, 2011
Last update date
Jul 15, 2011
Contact name
Giovanni Coppola
E-mail(s)
gcoppola@ucla.edu
Phone
310-794-4172
Organization name
UCLA
Department
Psychiatry and Neurology
Lab
Neurogenetics
Street address
1524 Gonda, 695 Charles Young Drive South
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL85
Series (1)
GSE30691
Multiple chronic pain states are associated with a common amino acid-changing allele in KCNS1
Data table header descriptions
ID_REF
VALUE
Log2 transformed, quantile normalized expresssion levels
Data table
ID_REF
VALUE
A01157cds_s_at
4.865725982
A03913cds_s_at
7.098304755
A04674cds_s_at
5.285570149
A07543cds_s_at
5.499596404
A09811cds_s_at
7.296065927
A16585cds_s_at
5.344588494
A17753cds_s_at
5.061377677
A30543cds_s_at
5.445758789
A44407cds_at
5.377731354
AA108277_at
6.864292383
AA108308_i_at
3.927411505
AA108308_s_at
7.186277813
AA684537_at
8.148903508
AA684929_f_at
6.776848092
AA684960_f_at
6.702773793
AA684963_at
8.289681591
AA685112_at
7.887081088
AA685152_r_at
8.214112509
AA685376_f_at
6.472836928
AA685876_at
8.560773194
Total number of rows:
8799
Table truncated, full table size
216 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM761254.CEL.gz
1.8 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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