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Sample GSM771428 Query DataSets for GSM771428
Status Public on Aug 18, 2011
Title Mouse ES-derived motor neuron_GFP hi_rep1
Sample type RNA
 
Source name Mouse embryonic stem cell-derived motor neurons
Organism Mus musculus
Characteristics genotype: Hb9::GFP-transgenic
gfp fluorescence: GFP-high
cell line: V6.5
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent
Label biotin
Label protocol Biotinylated cRNA were prepared by double amplification with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description FACS-purified and double-amplified
Data processing The data were normalized using cubic spline normalization in BeadStudio.
 
Submission date Aug 02, 2011
Last update date Aug 18, 2011
Contact name Esther Yesde Son
E-mail(s) son@fas.harvard.edu
Phone 617-496-5611
Fax 617-384-5611
Organization name Harvard University
Department Stem Cells and Regenerative Biology
Lab Eggan
Street address 7 Divinity Avenue
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL6885
Series (1)
GSE31160 Global gene expression analysis of three different types of mouse motor neurons

Data table header descriptions
ID_REF
VALUE cubic spline normalized
DETECTION PVAL

Data table
ID_REF VALUE DETECTION PVAL
ILMN_1212607 -1.022548 0.5841424
ILMN_1212612 0.5468425 0.5210356
ILMN_1212619 -2.52511 0.6553398
ILMN_1212628 12.15893 0.2459547
ILMN_1212632 20.42333 0.1407767
ILMN_1212636 12.37328 0.2427184
ILMN_1212637 -2.242765 0.6472492
ILMN_1212645 -7.562407 0.8559871
ILMN_1212648 22.33926 0.131068
ILMN_1212653 -4.582168 0.7362459
ILMN_1212672 154.7214 0
ILMN_1212682 1.222477 0.5
ILMN_1212683 -5.270031 0.7669903
ILMN_1212685 0.3083027 0.5307443
ILMN_1212692 11.35894 0.2508091
ILMN_1212693 38.2894 0.05016181
ILMN_1212695 4.949788 0.3932039
ILMN_1212698 46.59282 0.02750809
ILMN_1212702 128.7115 0
ILMN_1212703 6.929213 0.341424

Total number of rows: 25697

Table truncated, full table size 741 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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