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Sample GSM77690 Query DataSets for GSM77690
Status Public on Nov 01, 2005
Title control 1 hour
Sample type RNA
 
Source name heart
Organism Mus musculus
Characteristics Male C57BL6, whole heart
Extracted molecule total RNA
Extraction protocol Whole hearts were removed upon the sacrifice of the animal and immediately frozen in liquid nitrogen. RNA was extracted using Trizol reagent.
Label biotin
Label protocol Approximately 1 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description mouse whole heart control group 1 hour
Data processing Affymetrix GCOS 1.2
 
Submission date Oct 12, 2005
Last update date Aug 28, 2018
Contact name Alexander Turchin
E-mail(s) aturchin@partners.org
Organization name Brigham and Women's Hospital
Department Division of Endocrinology
Street address 221 Longwood Avenue
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL1261
Series (1)
GSE3440 Effect of aldosterone on gene expression in the heart
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE GCOS1.2-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 4378.5 P
AFFX-BioB-M_at 8908.8 P
AFFX-BioB-3_at 3220.9 P
AFFX-BioC-5_at 11385.7 P
AFFX-BioC-3_at 11244.6 P
AFFX-BioDn-5_at 8972.7 P
AFFX-BioDn-3_at 63448.4 P
AFFX-CreX-5_at 195755.5 P
AFFX-CreX-3_at 229392.6 P
AFFX-DapX-5_at 17.9 A
AFFX-DapX-M_at 467.5 P
AFFX-DapX-3_at 273.5 A
AFFX-LysX-5_at 104.4 A
AFFX-LysX-M_at 192.6 A
AFFX-LysX-3_at 109.7 A
AFFX-PheX-5_at 40.3 A
AFFX-PheX-M_at 36.2 A
AFFX-PheX-3_at 364 A
AFFX-ThrX-5_at 95.9 A
AFFX-ThrX-M_at 27.8 A

Total number of rows: 45101

Table truncated, full table size 854 Kbytes.




Supplementary file Size Download File type/resource
GSM77690.CEL.gz 5.7 Mb (ftp)(http) CEL
GSM77690.EXP.gz 508 b (ftp)(http) EXP

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